DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sfp24F and lectin-28C

DIOPT Version :10

Sequence 1:NP_001162870.1 Gene:Sfp24F / 8674016 FlyBaseID:FBgn0259958 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_652636.2 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:253 Species:Drosophila melanogaster


Alignment Length:161 Identity:41/161 - (25%)
Similarity:67/161 - (41%) Gaps:23/161 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LTGSTTFLVALFLFEVSRNVAGALEALQTTNDTFVRIGNSYYLIERKLQKNWFGAYEICRQQQAE 69
            ||..||.|         :|::..:..|.    .|.|||:.|..||..:|:||..|...|::....
  Fly   123 LTSITTSL---------KNMSAKINILH----RFKRIGSRYLHIEDIVQQNWTSALSACQKMGGN 174

  Fly    70 LISLETFDELRLVSEYLLANNIFERYWTSGTDLGTKGKHVWFSNGQPLSTDLWYGGEPNNKNNEE 134
            |.|:....:...:...|..:|   .|....:||..||..:..|:|:......|..|||..::.::
  Fly   175 LASIINEADFNAIVSQLSKDN---TYMIGISDLAEKGVFISVSSGKRAPFLKWNPGEPLYEHVDQ 236

  Fly   135 HCDELGSDFRPTKSPGMNDRNCNFESSFICE 165
            .|..:       .:.||...:|..:..:|||
  Fly   237 RCVSI-------HNGGMWVASCTSDFKYICE 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sfp24FNP_001162870.1 CLECT 45..165 CDD:153057 28/119 (24%)
lectin-28CNP_652636.2 SMC_N <20..>160 CDD:481474 15/49 (31%)
CLECT 160..260 CDD:153057 24/109 (22%)

Return to query results.
Submit another query.