DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sfp24F and Clec4b2

DIOPT Version :10

Sequence 1:NP_001162870.1 Gene:Sfp24F / 8674016 FlyBaseID:FBgn0259958 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_001005896.2 Gene:Clec4b2 / 450222 RGDID:1359354 Length:208 Species:Rattus norvegicus


Alignment Length:194 Identity:46/194 - (23%)
Similarity:75/194 - (38%) Gaps:43/194 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIVKLTGSTTFLVAL-----FLFEVSRNVAGALEALQTTNDTFVRIGNSYYLIERKL----QKNW 56
            :|..|..||.|:::.     |:.|....   .|..|.|.|..|....:. .::..|:    .|:|
  Rat    23 VISMLLLSTCFIMSCVVTYQFMMEKPNR---RLSELHTYNSNFTCCSDG-TMVSGKVWSCCPKDW 83

  Fly    57 --FGAY---------------EICRQQQAELISLETFDELRLVSEYLLANNIFERYWTSGTDLGT 104
              ||::               |.|....|.|:.:.:.:|...:      |.|.:..|...|.|..
  Rat    84 KSFGSHCYFTTDFVANWNESKEKCSHMGAHLLVIHSQEEQDFI------NGILDTRWGYFTGLSD 142

  Fly   105 KGKHVW-FSNGQPL--STDLWYGGEPNNKNNEEHCDELGSDFRPTKSPGMNDRNCNFESSFICE 165
            :|::.| :.:..|.  |...|:..|||  |:.|.|.|:  :.......|.||..|:.|...||:
  Rat   143 QGQNQWQWIDQTPYNESVTFWHEDEPN--NDYEKCVEI--NHHKDIGWGWNDIVCSSEHKSICQ 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sfp24FNP_001162870.1 CLECT 45..165 CDD:153057 33/143 (23%)
Clec4b2NP_001005896.2 CLECT_DC-SIGN_like 79..202 CDD:153060 32/132 (24%)

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