DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sfp24F and Mrc2

DIOPT Version :10

Sequence 1:NP_001162870.1 Gene:Sfp24F / 8674016 FlyBaseID:FBgn0259958 Length:175 Species:Drosophila melanogaster
Sequence 2:XP_006532469.1 Gene:Mrc2 / 17534 MGIID:107818 Length:1513 Species:Mus musculus


Alignment Length:142 Identity:36/142 - (25%)
Similarity:58/142 - (40%) Gaps:24/142 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 RIGNSYYLIERKLQKNWFGAYEICRQQQAELISLETFDELRLVSEYLLANNIFERY----WTSGT 100
            ::.:|.|....:...:|..|:..|.||.|:|:|:..      :.|....|.:...|    |....
Mouse   277 QLTDSCYQFNFQSTLSWREAWASCEQQGADLLSITE------IHEQTYINGLLTGYSSTLWIGLN 335

  Fly   101 DLGTKGKHVWFSNGQPLSTDLWYGGEPNNKNNEEHCDELGSDFRPTKSPGMNDRNCNFESSFIC- 164
            ||.|.|...| |:..||....|...:|:|. .||:|..:    |...|.|..:.:|:....::| 
Mouse   336 DLDTSGGWQW-SDNSPLKYLNWESDQPDNP-GEENCGVI----RTESSGGWQNHDCSIALPYVCK 394

  Fly   165 -------EEVQP 169
                   |.:||
Mouse   395 KKPNATVEPIQP 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sfp24FNP_001162870.1 CLECT 45..165 CDD:153057 32/131 (24%)
Mrc2XP_006532469.1 beta-trefoil_Ricin_MRC2 76..199 CDD:467786
FN2 214..262 CDD:128373
CLECT 281..395 CDD:153057 33/125 (26%)
CLECT 416..539 CDD:214480
CLECT 555..678 CDD:214480
CLECT 703..843 CDD:214480
CLECT 863..985 CDD:214480
CLECT 1006..1142 CDD:214480
CLECT 1165..1277 CDD:214480
CLECT 1294..1427 CDD:214480
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.