DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sfp24F and Mrc1

DIOPT Version :10

Sequence 1:NP_001162870.1 Gene:Sfp24F / 8674016 FlyBaseID:FBgn0259958 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_032651.2 Gene:Mrc1 / 17533 MGIID:97142 Length:1456 Species:Mus musculus


Alignment Length:115 Identity:36/115 - (31%)
Similarity:62/115 - (53%) Gaps:8/115 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 QKNWFGAYEICRQQQAELISLETFDELRLVSEYLLANNIFERYWTSGTDLGTKGKHVWFSNGQPL 117
            :|.||.:.:.|:....||.|:::.||.:::...:.::..:...:..|...|:..:...:|:|.|:
Mouse   670 KKTWFESRDFCKAIGGELASIKSKDEQQVIWRLITSSGSYHELFWLGLTYGSPSEGFTWSDGSPV 734

  Fly   118 STDLWYGGEPNNKNNEEHCDELGSDFRPTKSPGM--NDRNCNFESSFICE 165
            |.:.|..|||||..|.|:|.||..|      |||  ||.||...:::||:
Mouse   735 SYENWAYGEPNNYQNVEYCGELKGD------PGMSWNDINCEHLNNWICQ 778

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sfp24FNP_001162870.1 CLECT 45..165 CDD:153057 35/113 (31%)
Mrc1NP_032651.2 beta-trefoil_Ricin_MRC1 23..145 CDD:467785
FN2 161..209 CDD:128373
CLECT 234..342 CDD:153057
CLECT 362..487 CDD:214480
CLECT 504..626 CDD:214480
CLECT 659..779 CDD:153057 36/115 (31%)
CLECT 802..923 CDD:214480
CLECT 944..1079 CDD:214480
CLECT 1096..1212 CDD:214480
CLECT 1229..1355 CDD:214480
Blue background indicates that the domain is not in the aligned region.

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