DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sfp24F and clec-8

DIOPT Version :10

Sequence 1:NP_001162870.1 Gene:Sfp24F / 8674016 FlyBaseID:FBgn0259958 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_496687.2 Gene:clec-8 / 174893 WormBaseID:WBGene00012582 Length:419 Species:Caenorhabditis elegans


Alignment Length:150 Identity:36/150 - (24%)
Similarity:56/150 - (37%) Gaps:43/150 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 ERKLQKNWFG-------------AYEICRQQQAELISLETFDELRLVSEYLLANNIFERYWTSGT 100
            |.:.|||:.|             |.:||::....:.|:.:..|.|    |:.||  |..|  |..
 Worm   158 EDQCQKNYNGYCYFDFAPLPFVSAQKICKENCGIIASILSPMENR----YINAN--FYTY--SAL 214

  Fly   101 DLGTKGKHVWFSNGQPLSTDLWYGGEPNNKNNEEHCDELG----------SDFRPTKSPGMNDRN 155
            .:|.    .|..|    |:..|:.|...:.:|.:|....|          ....||.|  ....:
 Worm   215 LIGA----TWSYN----SSYTWFDGSSWSYHNIDHTARRGGVCLAMSTGTGSMVPTGS--WYPVD 269

  Fly   156 CNFESSFICEEVQPKYNVCP 175
            |...:||:|:  :|....||
 Worm   270 CKASNSFLCK--RPAGTSCP 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sfp24FNP_001162870.1 CLECT 45..165 CDD:153057 32/138 (23%)
clec-8NP_496687.2 CLECT 23..152 CDD:214480
CLECT 165..279 CDD:214480 28/131 (21%)
CUB 303..413 CDD:238001
Blue background indicates that the domain is not in the aligned region.

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