DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sfp24F and clec4e

DIOPT Version :10

Sequence 1:NP_001162870.1 Gene:Sfp24F / 8674016 FlyBaseID:FBgn0259958 Length:175 Species:Drosophila melanogaster
Sequence 2:XP_004917035.1 Gene:clec4e / 100497788 XenbaseID:XB-GENE-6035508 Length:218 Species:Xenopus tropicalis


Alignment Length:180 Identity:47/180 - (26%)
Similarity:83/180 - (46%) Gaps:33/180 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LVALFLFEVSRNVAG---------------------ALEALQTTNDT-FVRIGNSYYLIERKLQK 54
            ::|||:..::|:.:|                     |:||.:...|: :::..:|.|.|..| :.
 Frog    43 ILALFITVITRSTSGSSSADSNDLKNYVAQLASKVNAMEAKKEACDSAWIQFEDSCYYITTK-KT 106

  Fly    55 NWFGAYEICRQQQAELISLETFDELRLVSEYLLANNIFERYWTSGTDLGTKGKHVWFSNGQPLST 119
            ||..|...|.|:..:|:.:.:..|.:.:.|....:|: :|:|...:|:..:|...|. :|...||
 Frog   107 NWQKARSFCVQEGGDLVVVNSEKEQKFLKEKSGVSNL-KRFWIGLSDIEEEGTWTWV-DGTDYST 169

  Fly   120 --DLWYGGEPNNKNNEEHCDELGSDFRPTKSPGMNDRNCNFESSF-ICEE 166
              ..|..||||:....|.|..|   :.||..  .||.:|.|:..: |||:
 Frog   170 SYQFWKKGEPNDHLTNEDCAHL---WNPTGE--WNDVHCTFQEPYAICEK 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sfp24FNP_001162870.1 CLECT 45..165 CDD:153057 35/122 (29%)
clec4eXP_004917035.1 CLECT_DC-SIGN_like 87..214 CDD:153060 38/134 (28%)

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