DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sfp24F and cd302

DIOPT Version :10

Sequence 1:NP_001162870.1 Gene:Sfp24F / 8674016 FlyBaseID:FBgn0259958 Length:175 Species:Drosophila melanogaster
Sequence 2:XP_031749737.1 Gene:cd302 / 100489250 XenbaseID:XB-GENE-983080 Length:1838 Species:Xenopus tropicalis


Alignment Length:118 Identity:28/118 - (23%)
Similarity:53/118 - (44%) Gaps:22/118 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 WFGAYEICRQQQAELISLETFDELRLVSEYLLANNIFERYWTSGTDLGTKGKHVWFSNGQPLSTD 120
            |..||..|:.|.|:|:|:.|.:||::.::   ..::.:..|.....|.|.|...| |:..||...
 Frog   234 WKEAYISCQNQGADLLSISTPEELQVFTD---KEDVPDSVWIGLNHLDTSGGWQW-SDHTPLRFI 294

  Fly   121 LWYGGEPNNKN-------NEEHCDELGSDFRPTKSPGMNDRNCNFESSFICEE 166
            .|      :|:       :::.|..|.:|     :..|.:.:|.....:||::
 Frog   295 NW------DKDRASFSLLDDKDCAILNTD-----TGRMENIHCEKSLPYICKK 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sfp24FNP_001162870.1 CLECT 45..165 CDD:153057 27/115 (23%)
cd302XP_031749737.1 beta-trefoil_Ricin_LY75 23..139 CDD:467789
FN2 156..203 CDD:128373
CLECT 210..335 CDD:214480 27/115 (23%)
CLECT 354..476 CDD:214480
CLECT 493..612 CDD:214480
CLECT 630..771 CDD:214480
CLECT 803..912 CDD:153057
CLECT 933..1074 CDD:214480
CLECT 1099..1200 CDD:153057
CLECT 1232..1347 CDD:214480
CLECT 1390..1499 CDD:153057
CLECT 1628..1760 CDD:214480
Blue background indicates that the domain is not in the aligned region.

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