DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42495 and F40F8.3

DIOPT Version :10

Sequence 1:NP_001163464.1 Gene:CG42495 / 8674004 FlyBaseID:FBgn0260027 Length:142 Species:Drosophila melanogaster
Sequence 2:NP_496387.2 Gene:F40F8.3 / 185540 WormBaseID:WBGene00009576 Length:146 Species:Caenorhabditis elegans


Alignment Length:131 Identity:27/131 - (20%)
Similarity:58/131 - (44%) Gaps:22/131 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VAGSFAAAGSFFGKLPSHLSAQKLLNTSQINEDFSYLEIALLQLLPLVLMVTCNVCNLRFFLKAL 76
            |||...:.|:..|||......::....|.:                 .:.:..|:.....:.:||
 Worm    37 VAGMCGSMGAVSGKLAFDWDLEQYARCSCV-----------------AVFIGSNIVMWATYTRAL 84

  Fly    77 QMTEQTLTCVVLTAASNYVLSFVLGALVYREPLTVLSGIGITLILAGLWFLCDGGTVESEKQDKM 141
            .:::.|.|.:::..|.|:.|:.:||:|::.|..:.|..:.:.:::.||..|     :.|:.:|..
 Worm    85 ALSDCTSTPMIINMACNFALTGILGSLIFSESHSYLWWLLLIMLITGLTML-----LSSKHEDLK 144

  Fly   142 E 142
            |
 Worm   145 E 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42495NP_001163464.1 TMEM234 <71..127 CDD:481150 14/55 (25%)
F40F8.3NP_496387.2 None

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