DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42495 and tmem42b

DIOPT Version :10

Sequence 1:NP_001163464.1 Gene:CG42495 / 8674004 FlyBaseID:FBgn0260027 Length:142 Species:Drosophila melanogaster
Sequence 2:XP_003200553.1 Gene:tmem42b / 100537949 ZFINID:ZDB-GENE-170410-1 Length:154 Species:Danio rerio


Alignment Length:133 Identity:41/133 - (30%)
Similarity:57/133 - (42%) Gaps:15/133 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YSLVAGSFAAAGSFFGKL---PSHLSA-----------QKLLNTSQINEDFSYLEIALLQLLPLV 59
            |:|:||...|..|...||   ..:|..           |:............:|.|. |:||...
Zfish     7 YALLAGFLGAVASSSAKLSLGTDYLKGVCETGMRTWGEQRKFTQHSDTSACDWLHIP-LRLLCGG 70

  Fly    60 LMVTCNVCNLRFFLKALQMTEQTLTCVVLTAASNYVLSFVLGALVYREPLTVLSGIGITLILAGL 124
            |:.|||.....|..|||:.:..:....|.|.|||.:.|..||.|::.|....|..:||:|.|:||
Zfish    71 LLFTCNAVMWTFLAKALRSSCSSARTTVTTTASNLISSAFLGQLIFGETHVALWWVGISLTLSGL 135

  Fly   125 WFL 127
            ..|
Zfish   136 LVL 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42495NP_001163464.1 TMEM234 <71..127 CDD:481150 21/55 (38%)
tmem42bXP_003200553.1 None

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