DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42542 and AT1G64150

DIOPT Version :9

Sequence 1:NP_001163614.1 Gene:CG42542 / 8674000 FlyBaseID:FBgn0260659 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_564825.1 Gene:AT1G64150 / 842719 AraportID:AT1G64150 Length:370 Species:Arabidopsis thaliana


Alignment Length:479 Identity:94/479 - (19%)
Similarity:144/479 - (30%) Gaps:238/479 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LMVVLTFGTICAAEAQPDSADNAVIESGIQSNLDVQGDLNRPTDLSSLAEKPKDAADRPKTKGTF 94
            ||.:...|::......|..|.:: |.:..||.:...|||.   |:||                  
plant   115 LMFLAVSGSVALLGTDPAFAASS-IPNVTQSLVTSFGDLG---DISS------------------ 157

  Fly    95 IDAFTASISVILLTELGDKTFFIAAIMAMRHPRLIVFGGAIAALALMTVLSCAFGMAANFIPKIY 159
              .|.::..:|..:|||||||||||::|.|:....||.|...||.:||::|...|...:::.::.
plant   158 --GFASAFLLIFFSELGDKTFFIAALLAARNSAATVFVGTFGALGIMTIISVVLGRTFHYVDEVL 220

  Fly   160 TY-----------YISTALFLIFGLKMLYDGYKMKPTDAQEELEEVQTDLRKREDELLRKASRKY 213
            .:           ..:..|.:.||:..|.|..                                 
plant   221 PFRFGGTDLPIDDIAAVCLLVYFGVSTLLDAV--------------------------------- 252

  Fly   214 EDAEGKRKNSNSDKEDASEQALIHGRNSISTAAGSTTDMQHRQRKQRNHLNNNNSKQNSCDKTGN 278
             ..|||.                                                          
plant   253 -SDEGKA---------------------------------------------------------- 258

  Fly   279 DDDDRDQHESEVFLKEGGRIVEQLKLKTFPSSPAHSAASSNQTEQTNSIAASTATVDVQLAGHPT 343
               |.:|.|:|:.:.|                                                 
plant   259 ---DEEQKEAELAVSE------------------------------------------------- 271

  Fly   344 DPSVGGASEPRAPLAGHDSMHSLNGSLNGESGPVNGALKARLDRDVNAALVNDAESGRRRPQKRG 408
                                      |:|     ||           |.:|..|.:         
plant   272 --------------------------LSG-----NG-----------AGIVAAANT--------- 285

  Fly   409 ATYFTMRILAQAFTMTFLAEWGDRSQLTTIILAASKDVYGVIAGGIIGHCICTGLAVIGGRLVAS 473
                    :...|.:.|:|||||:|..:||.|||:....|||||.:.||...|.|||:||.|:.:
plant   286 --------IISTFALVFVAEWGDKSFFSTIALAAASSPLGVIAGALAGHGAATLLAVLGGSLLGN 342

  Fly   474 KISVRTVTIVGGIVFIGFAIYAVA 497
            .:|.:.:..|||::|:.||...||
plant   343 FLSEKAIAYVGGVLFLVFAAVTVA 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42542NP_001163614.1 Gdt1 97..>183 CDD:225030 29/96 (30%)
UPF0016 104..172 CDD:279508 24/78 (31%)
Gdt1 <416..496 CDD:225030 34/79 (43%)
UPF0016 423..492 CDD:279508 31/68 (46%)
AT1G64150NP_564825.1 Gdt1 159..370 CDD:225030 80/411 (19%)
UPF0016 165..>213 CDD:279508 23/47 (49%)
UPF0016 292..361 CDD:279508 31/68 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D919566at2759
OrthoFinder 1 1.000 - - FOG0002397
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12608
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.880

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