DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42542 and AT5G36290

DIOPT Version :9

Sequence 1:NP_001163614.1 Gene:CG42542 / 8674000 FlyBaseID:FBgn0260659 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_568535.1 Gene:AT5G36290 / 833627 AraportID:AT5G36290 Length:293 Species:Arabidopsis thaliana


Alignment Length:445 Identity:103/445 - (23%)
Similarity:152/445 - (34%) Gaps:210/445 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 GIQSNLDVQGDLNRPTDLSSLAEKPKDAADRPKTKGTFIDAFTASISVILLTELGDKTFFIAAIM 121
            |:.:.:|..|.|....||.:             |..:..||..:|.|:||:||:||:||.|||:|
plant    57 GVDTVVDNIGALGLNLDLDA-------------TAPSVFDALFSSFSMILVTEIGDETFIIAALM 108

  Fly   122 AMRHPRLIVFGGAIAALALMTVLSCAFG-MAANFIPKIYTYYISTALFLIFGLKMLYDGYKMKPT 185
            |||||:..|..||::||.:||:||...| :..|.|.:.:|...:|.|:..|||::||..::    
plant   109 AMRHPKATVLSGALSALFVMTILSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWR---- 169

  Fly   186 DAQEELEEVQTDLRKREDELLRKASRKYEDAEGKRKNSNSDKEDASEQALIHGRNSISTAAGSTT 250
                     .||.:..:.:.:.:...|.|..:||                               
plant   170 ---------STDSKSNQKKEMEEVEEKLESGQGK------------------------------- 194

  Fly   251 DMQHRQRKQRNHLNNNNSKQNSCDKTGNDDDDRDQHESEVFLKEGGRIVEQLKLKTFPSSPAHSA 315
                                                                             
plant   195 ----------------------------------------------------------------- 194

  Fly   316 ASSNQTEQTNSIAASTATVDVQLAGHPTDPSVGGASEPRAPLAGHDSMHSLNGSLNGESGPVNGA 380
                                                                             
plant   195 ----------------------------------------------------------------- 194

  Fly   381 LKARLDRDVNAALVNDAESGRRRPQKRGATYFTMRILAQAFTMTFLAEWGDRSQLTTIILAASKD 445
                                  .|.:|..:.|...|..::|.:|||||||||||:.||.||..|:
plant   195 ----------------------TPFRRLFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKN 237

  Fly   446 VYGVIAGGIIGHCICTGLAVIGGRLVASKISVRTVTIVGGIVFIGFAIYAVAIPP 500
            ..||..|..|||.:||.|||:||.::||:||.|||..|||::|:||::.:...||
plant   238 AIGVAIGASIGHTVCTSLAVVGGSMLASRISQRTVATVGGLLFLGFSVSSYFYPP 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42542NP_001163614.1 Gdt1 97..>183 CDD:225030 40/86 (47%)
UPF0016 104..172 CDD:279508 32/68 (47%)
Gdt1 <416..496 CDD:225030 44/79 (56%)
UPF0016 423..492 CDD:279508 41/68 (60%)
AT5G36290NP_568535.1 Gdt1 84..289 CDD:225030 93/400 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 96 1.000 Domainoid score I2480
eggNOG 1 0.900 - - E1_COG2119
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H5411
Inparanoid 1 1.050 194 1.000 Inparanoid score I1353
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D919566at2759
OrthoFinder 1 1.000 - - FOG0002397
OrthoInspector 1 1.000 - - otm3091
orthoMCL 1 0.900 - - OOG6_101338
Panther 1 1.100 - - O PTHR12608
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2098
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.830

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