DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42542 and tmem165

DIOPT Version :9

Sequence 1:NP_001163614.1 Gene:CG42542 / 8674000 FlyBaseID:FBgn0260659 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_997848.1 Gene:tmem165 / 324501 ZFINID:ZDB-GENE-030131-3222 Length:305 Species:Danio rerio


Alignment Length:487 Identity:160/487 - (32%)
Similarity:199/487 - (40%) Gaps:215/487 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LALMVVLTFGTICAA---------EAQPDSADNAVIESGIQSNLDVQGDLNRPTDLSSLAEKPKD 83
            |.|:.|:.|.....|         |.||     |.::.|...:                |..|..
Zfish    18 LVLLSVVLFSAGVTATQEEKKVINEEQP-----AEVQKGTTDH----------------APGPAI 61

  Fly    84 AADRPKTKGT--FIDAFTASISVILLTELGDKTFFIAAIMAMRHPRLIVFGGAIAALALMTVLSC 146
            ..|.| .||.  ||.||.|:||||:::||||||||||||||||:.||.|..||:.||.|||.||.
Zfish    62 RVDEP-NKGNLGFIHAFAAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSV 125

  Fly   147 AFGMAANFIPKIYTYYISTALFLIFGLKMLYDGYKMKPTDAQEELEEVQTDLRKREDELLRKASR 211
            .||.|...||:|||||||||||.|||::||.:|.:|.|.:.||||||||.:::|:::||     :
Zfish   126 LFGYATTIIPRIYTYYISTALFAIFGVRMLREGLRMSPDEGQEELEEVQAEIKKKDEEL-----Q 185

  Fly   212 KYEDAEGKRKNSNSDKEDASEQALIHGRNSISTAAGSTTDMQHRQRKQRNHLNNNNSKQNSCDKT 276
            :|:.|.|                              ..|:                        
Zfish   186 RYKLANG------------------------------APDV------------------------ 196

  Fly   277 GNDDDDRDQHESEVFLKEGGRIVEQLKLKTFPS--SPAHSAASSNQTEQTNSIAASTATVDVQLA 339
                             |.|.....|..:.:||  ||                            
Zfish   197 -----------------EAGTAANMLPQRKWPSLISP---------------------------- 216

  Fly   340 GHPTDPSVGGASEPRAPLAGHDSMHSLNGSLNGESGPVNGALKARLDRDVNAALVNDAESGRRRP 404
                                                                             
Zfish   217 ----------------------------------------------------------------- 216

  Fly   405 QKRGATYFTMRILAQAFTMTFLAEWGDRSQLTTIILAASKDVYGVIAGGIIGHCICTGLAVIGGR 469
                       |..||.|:||||||||||||.||:|||.:|.:||..||.:|||:||||||||||
Zfish   217 -----------IFIQALTLTFLAEWGDRSQLATIVLAAREDPFGVAVGGTLGHCLCTGLAVIGGR 270

  Fly   470 LVASKISVRTVTIVGGIVFIGFAIYAVAIPPD 501
            :||.|||||||||:|||||:.||..|:.|.||
Zfish   271 MVAQKISVRTVTIIGGIVFLAFAFSALFIKPD 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42542NP_001163614.1 Gdt1 97..>183 CDD:225030 57/85 (67%)
UPF0016 104..172 CDD:279508 47/67 (70%)
Gdt1 <416..496 CDD:225030 57/79 (72%)
UPF0016 423..492 CDD:279508 51/68 (75%)
tmem165NP_997848.1 Gdt1 76..298 CDD:225030 139/401 (35%)
UPF0016 83..151 CDD:279508 47/67 (70%)
Med9 <157..188 CDD:284875 14/35 (40%)
UPF0016 224..293 CDD:279508 51/68 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596902
Domainoid 1 1.000 121 1.000 Domainoid score I5675
eggNOG 1 0.900 - - E1_COG2119
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H5411
Inparanoid 1 1.050 277 1.000 Inparanoid score I2909
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D565030at33208
OrthoFinder 1 1.000 - - FOG0002397
OrthoInspector 1 1.000 - - oto39718
orthoMCL 1 0.900 - - OOG6_101338
Panther 1 1.100 - - LDO PTHR12608
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2127
SonicParanoid 1 1.000 - - X2098
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.790

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