DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42542 and SPAC186.05c

DIOPT Version :9

Sequence 1:NP_001163614.1 Gene:CG42542 / 8674000 FlyBaseID:FBgn0260659 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_595023.1 Gene:SPAC186.05c / 2542574 PomBaseID:SPAC186.05c Length:262 Species:Schizosaccharomyces pombe


Alignment Length:433 Identity:99/433 - (22%)
Similarity:154/433 - (35%) Gaps:180/433 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 LDVQGDLNRPTDLSSLAEKPKDAADRPKTKGTFIDAFTASISVILLTELGDKTFFIAAIMAMRHP 126
            ::|:..||..|.|.||          ..:.|: :.....|||:|:..|||||:|.:.|::|.::.
pombe     2 INVESPLNLETTLGSL----------QFSHGS-VQNIGMSISMIIGCELGDKSFIVTALLAYQYG 55

  Fly   127 RLIVFGGAIAALALMTVLSCAFGMAANFI-PKIYTYYISTALFLIFGLKMLYDGYKMKPTDAQEE 190
            |..||.|:..||..||..:...|.||.|: ||..|:.:...||||||:|||            :|
pombe    56 RASVFFGSYLALFFMTSFAVLVGRAAPFLFPKSITHILGGTLFLIFGVKML------------KE 108

  Fly   191 LEEVQTDLRKREDELLRKASRKYEDAEGKRKNSNSDKEDASEQALIHGRNSISTAAGSTTDMQHR 255
            .:||      ||                            |:|:|                    
pombe   109 SKEV------RE----------------------------SQQSL-------------------- 119

  Fly   256 QRKQRNHLNNNNSKQNSCDKTGNDDDDRDQHESEVFLKEGGRIVEQLKLKTFPSSPAHSAASSNQ 320
                          :|..||.           .::.:.|     |.:|.......||.:.:||..
pombe   120 --------------ENEFDKV-----------EKIIVNE-----EDMKKTLELGLPASNRSSSTL 154

  Fly   321 TEQTNSIAASTATVDVQLAGHPTDPSVGGASEPRAPLAGHDSMHSLNGSLNGESGPVNGALKARL 385
            .::...:.:.:                                                ..|...
pombe   155 KDKFFKVFSMS------------------------------------------------CFKNLF 171

  Fly   386 DRDVNAALVNDAESGRRRPQKRGATYFTMRILAQAFTMTFLAEWGDRSQLTTIILAASKDVYGVI 450
            .:..:.|.:                        :||.:.|::|.|||||:.||:::|.:.|..|.
pombe   172 SKKFSRAFI------------------------KAFALIFVSELGDRSQIATIVMSAKEKVLDVF 212

  Fly   451 AGGIIGHCICTGLAVIGGRLVASKISVRTVTIVGGIVFIGFAI 493
            .|..|||.:||.:|||.||.:::||.:..|...|||||:.|.|
pombe   213 IGVNIGHMLCTMVAVIVGRYISNKIEMYKVLFFGGIVFMIFGI 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42542NP_001163614.1 Gdt1 97..>183 CDD:225030 36/86 (42%)
UPF0016 104..172 CDD:279508 28/68 (41%)
Gdt1 <416..496 CDD:225030 35/78 (45%)
UPF0016 423..492 CDD:279508 31/68 (46%)
SPAC186.05cNP_595023.1 Gdt1 24..262 CDD:225030 91/400 (23%)
UPF0016 33..102 CDD:279508 28/68 (41%)
UPF0016 185..254 CDD:279508 31/68 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 91 1.000 Domainoid score I2040
eggNOG 1 0.900 - - E1_COG2119
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 163 1.000 Inparanoid score I1225
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002397
OrthoInspector 1 1.000 - - otm47283
orthoMCL 1 0.900 - - OOG6_101338
Panther 1 1.100 - - O PTHR12608
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2098
TreeFam 1 0.960 - -
1110.820

Return to query results.
Submit another query.