DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42542 and Y54F10AL.1

DIOPT Version :9

Sequence 1:NP_001163614.1 Gene:CG42542 / 8674000 FlyBaseID:FBgn0260659 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_497567.1 Gene:Y54F10AL.1 / 175368 WormBaseID:WBGene00021847 Length:297 Species:Caenorhabditis elegans


Alignment Length:484 Identity:142/484 - (29%)
Similarity:204/484 - (42%) Gaps:206/484 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 MALALMVVLTFGTICAAEAQPDSADNAVIESGIQSNLDVQGDLNRPTDLSSLAEKPKDAADRPKT 90
            :.::|::::...|:..::|..|           ...:||:      .|.:::.||.::...:.:.
 Worm     8 LLVSLLILVPHVTVAESDAVKD-----------VDTVDVK------LDETAVVEKTEEKEAQKEH 55

  Fly    91 KG------TFIDAFTASISVILLTELGDKTFFIAAIMAMRHPRLIVFGGAIAALALMTVLSCAFG 149
            |.      :|...|.||.|||:::||||||:|||.||:|||.||.||.||:.|||||||||...|
 Worm    56 KKISSEDISFYHGFLASFSVIVVSELGDKTWFIAVIMSMRHSRLTVFSGAMGALALMTVLSACLG 120

  Fly   150 MAANFIPKIYTYYISTALFLIFGLKMLYDGYKMKPTDAQEELEEVQTDLRKREDELLRKASRKYE 214
            .....||:..|||:|||||.:||||||::|:.|.|.:.||..||.|.::.|||.||         
 Worm   121 WITQVIPRAVTYYLSTALFALFGLKMLHEGWTMSPNEGQEGYEEAQAEVAKREGEL--------- 176

  Fly   215 DAEGKRKNSNSDKEDASEQALIHGRNSISTAAGSTTDMQHRQRKQRNHLNNNNSKQNSCDKTGND 279
                          ||.:..::.|...:::        |...||                     
 Worm   177 --------------DAGKFEMLEGGGGVAS--------QSETRK--------------------- 198

  Fly   280 DDDRDQHESEVFLKEGGRIVEQLKLKTFPSSPAHSAASSNQTEQTNSIAASTATVDVQLAGHPTD 344
                      :||                                                    
 Worm   199 ----------IFL---------------------------------------------------- 201

  Fly   345 PSVGGASEPRAPLAGHDSMHSLNGSLNGESGPVNGALKARLDRDVNAALVNDAESGRRRPQKRGA 409
                                                                             
 Worm   202 ----------------------------------------------------------------- 201

  Fly   410 TYFTMRILAQAFTMTFLAEWGDRSQLTTIILAASKDVYGVIAGGIIGHCICTGLAVIGGRLVASK 474
              ||.||..:||::||:||||||||||||||.|.:::.|||.|||:||.:|||:|||||::||.:
 Worm   202 --FTSRIFIEAFSLTFVAEWGDRSQLTTIILGARENIAGVIGGGILGHALCTGIAVIGGKIVAQR 264

  Fly   475 ISVRTVTIVGGIVFIGFAIYAVAIPPDDI 503
            |||||||::||:||:.||:.|:.|  :||
 Worm   265 ISVRTVTLIGGVVFLLFALSALFI--NDI 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42542NP_001163614.1 Gdt1 97..>183 CDD:225030 53/85 (62%)
UPF0016 104..172 CDD:279508 42/67 (63%)
Gdt1 <416..496 CDD:225030 51/79 (65%)
UPF0016 423..492 CDD:279508 46/68 (68%)
Y54F10AL.1NP_497567.1 Gdt1 69..294 CDD:225030 131/406 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167939
Domainoid 1 1.000 113 1.000 Domainoid score I3862
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H5411
Inparanoid 1 1.050 258 1.000 Inparanoid score I1933
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D565030at33208
OrthoFinder 1 1.000 - - FOG0002397
OrthoInspector 1 1.000 - - oto19529
orthoMCL 1 0.900 - - OOG6_101338
Panther 1 1.100 - - LDO PTHR12608
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2127
SonicParanoid 1 1.000 - - X2098
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.930

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