DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75b and grik5

DIOPT Version :9

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_001315085.1 Gene:grik5 / 798791 ZFINID:ZDB-GENE-070821-6 Length:1067 Species:Danio rerio


Alignment Length:754 Identity:154/754 - (20%)
Similarity:272/754 - (36%) Gaps:220/754 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLQLHNLILHNLIHMAKLSHVLILHCSLSHLALLAQSKNIFTQFQPLHSDIQLNDDFLNHNILKL 65
            :|:|..||...||....|| :.:|..:|....||.                ::.||       |:
Zfish   184 LLRLEELIRRFLISRETLS-IRMLDDNLDPTPLLK----------------EIRDD-------KI 224

  Fly    66 G-VFLDINCDKSGTVLDMASAKRFFSHRYHWLIYDRSMNFSV--LESHFKEAQIFVDADVTYVTH 127
            . :.:|.|...|..:|..||.....|..|.:::  .:|:|.:  |:....|....|...:...||
Zfish   225 ATIIIDANASISYLILKKASELGMTSAFYKYIL--TTMDFPLLWLDDIVDEQSNIVGFSMFNTTH 287

  Fly   128 DPFSKNF-------------------------LLYDVYNKGRQLGGELNITADREIFCNKTNC-- 165
             ||...|                         ||:|..:.......|||  ..:||.....:|  
Zfish   288 -PFYLEFIRSLNLSWREGCDINPYPGPALSSALLFDAVHVVVSAVQELN--RSQEIGVKPLSCTS 349

  Fly   166 -RVERYLSEL--YTRSALQHRKSFTGLTMRA---------------------------------T 194
             ::.::.:.|  |.|..     .:.|||.|.                                 |
Zfish   350 PQIWQHGTSLMNYLRMV-----EYDGLTGRVEFNSKGQRTNYTLHILEKHRGGHKEIGIWYSNNT 409

  Fly   195 AVVTALPLNVSIKE--------IFDFMNSKYRIQLDTYARLGYQARQ-----------PLRDMLD 240
            .::.:..|::::.|        |...:.:.|.::     ::.||..:           .||::.|
Zfish   410 LLMNSTSLDINVSETLANKSLIITTILENPYVMR-----KINYQEFEGNEQYEGFCVDMLRELSD 469

  Fly   241 CKFKYIFRDRWSDGNATG---------GMIGDLILDKADLAIAPFIYSFDRAL---FLQPITK-- 291
            . .|:.:|.:..|....|         ||:|:||..|||||:|.|..:.:|..   |.:|...  
Zfish   470 I-LKFTYRIKLVDDGLYGAPEPNGSWTGMVGELINRKADLAVAAFTITSEREKVIDFSKPFMTLG 533

  Fly   292 FSVFREICMFRNPRSVSAGLSATEFLQPFSGGVWLTFALLLLLAGCLLWVTFILERRKQWKP--- 353
            .|:...:.:.|.|...|       ||.|||..|||...|..|...|:|:::..|...:.:.|   
Zfish   534 ISILYRVHIGRKPGYFS-------FLDPFSPAVWLFMLLAYLAVSCVLFLSARLSPYEWYNPHPC 591

  Fly   354 ------------SLLTSCLLSFGAGCIQGAWLTPRSMGGR------MAFFALMVTSYLMYNYYTS 400
                        :|..|.....|....||:.:.||::..|      .||..::::|      ||:
Zfish   592 LRERRDLLENQYTLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISS------YTA 650

  Fly   401 IVVSKLLGQPIKSNIRTLQQLAD-SNLDVGIEPTVY---TRIYVETSEEPDVRDLYRKKVLGSKR 461
            .:.:.|..|.::..|.:...||| :|:..|   |::   |..:...|.....:.::  ..:.||:
Zfish   651 NLAAFLTVQRMEVPIESPDDLADQTNIQYG---TIHGGSTMTFFMNSRYQTYQRMW--NYMYSKQ 710

  Fly   462 SPDKIWIPTEAGVLSVRDQEGFVYITGVATGYEFVRKHFL--AHQI--CELNEI-PLRDASHTHT 521
             |......||.|:..|           |.:.|.|:.:..:  .|:.  |.|.:| .|.|......
Zfish   711 -PSVFVKSTEEGIARV-----------VNSKYAFLLESTMNEYHRSLNCNLTQIGGLLDTKGYGI 763

  Fly   522 VLAKRSPYAELIKLSELRMLETG-VHFKHERSWMETKLHCYQHNHTVAVGLEYAAPLFIILLGAI 585
            .:...||:.:.:.|:.|::.|.. :.....|.|...|....:.:....:|:|....:|::|:..:
Zfish   764 GMPLGSPFRDELSLAVLQLQENNRLEILKRRWWEGGKCPKEEDHRAKGLGMENIGGIFVVLICGL 828

  Fly   586 ILCMGILGLEVIW--------------------HRHCTL 604
            |:.:.:..:|.:|                    |.|.|:
Zfish   829 IIAVFVAVMEFVWSTRRSAETDEVRPLSCDRQYHSHTTV 867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 81/344 (24%)
Lig_chan 343..585 CDD:278489 54/272 (20%)
grik5NP_001315085.1 PBP1_iGluR_Kainate_KA1_2 38..412 CDD:107389 50/261 (19%)
ANF_receptor 55..392 CDD:279440 49/241 (20%)
Periplasmic_Binding_Protein_Type_1 <313..383 CDD:299141 16/76 (21%)
Periplasmic_Binding_Protein_Type_2 427..797 CDD:304360 90/405 (22%)
Lig_chan 558..828 CDD:278489 61/292 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591258
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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