DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75b and grik1a

DIOPT Version :9

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:XP_009303592.1 Gene:grik1a / 798001 ZFINID:ZDB-GENE-030131-6502 Length:919 Species:Danio rerio


Alignment Length:660 Identity:138/660 - (20%)
Similarity:239/660 - (36%) Gaps:162/660 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 ILHCSLSHLALLAQSKNIFTQFQP------LHSDIQLNDDFLNHNILKLGVFLDINCDKSGTVLD 81
            :|:...|::|.:.|..::..|..|      |.|.|......|.::    .||:.....:..|.:.
Zfish   284 LLNLDDSYVASVIQKWSMERQLAPPKPESGLMSGIMTTAAALMYD----AVFMVAVASQRATQMT 344

  Fly    82 MASAKRFFSHRYH-WLIYDRSMNFSVLESHFKEAQIFVDADVTYVTHDPFSKNFLLYDVYNKGRQ 145
            ::|.:   .||:. |....|.||.      |||||           .|..:...:|    ||...
Zfish   345 VSSLQ---CHRHKPWRYGPRFMNL------FKEAQ-----------WDGLTGRIVL----NKTDG 385

  Fly   146 LGGELNITADREIFCNKTNCRVERYL------SELYTRSALQHRKSFTGLTM------------- 191
            |..|.|:    ::...|.:...:|..      ::|:|:..:.:  |:|||.:             
Zfish   386 LRKEFNL----DLISLKEDGTAKRVADGASRPNKLWTKIGVWN--SYTGLNLTEIKDNKNITDSL 444

  Fly   192 -RATAVVTALPLNVSI-----------------------KEIFDFMNSKYRIQLDTYARLGYQAR 232
             ..|.:||.:..|..:                       ||:.:.:...|.::|.|..:.|.|  
Zfish   445 ANRTLIVTTILENPYVMYKKSDKVLYGNDRFEGYCLDLLKELSNILGFTYEVKLVTDGKYGAQ-- 507

  Fly   233 QPLRDMLDCKFKYIFRDRWSDGNATGGMIGDLILDKADLAIAPFIYSFDRALFLQPITKFSVFRE 297
                               :|.....||:.:||...||||:||...::.|...:.....|.....
Zfish   508 -------------------NDKGEWNGMVRELIDHIADLAVAPLTITYVREKVIDFSKPFMTLGI 553

  Fly   298 ICMFRNPRSVSAGLSATEFLQPFSGGVWLTFALLLLLAGCLLWVTFILER--RKQW------KPS 354
            ..::|.|...:.|:.:  ||.|.:..:|:...|..|...|:|   |::.|  ..:|      .||
Zfish   554 SILYRKPNGTNPGVFS--FLNPLTPDIWMYVLLACLGVSCVL---FVIARFTPYEWYNPHPCNPS 613

  Fly   355 ---------LLTSCLLSFGAGCI--QGAWLTP-----RSMGGRMAFFALMVTSYLMYNYYTSIVV 403
                     ||.|  |.||...:  ||:.|.|     |.:||...||.|::.|....|....:.|
Zfish   614 SEVVENNFTLLNS--LWFGVAALMRQGSELMPKALSTRILGGIWWFFTLIIISSYTANLAAFLTV 676

  Fly   404 SKLLGQPIKSNIRTLQQLADSNLDVGIEPTVYTRIYVETSEEPDVRDLYRKKVLGSKRSPDKIWI 468
            .::                ||.:|...:....|||......:......::|..:.:.   :|:|.
Zfish   677 ERM----------------DSPIDSADDLAKQTRIEYGAVRDGSTMTFFKKSKISTY---EKMWA 722

  Fly   469 -----PTEAGVLSVRDQEGFVYITGVATGYEFVRKHFLAHQICELNEI-PLRDASHTHTVLAKRS 527
                 ...|.|.:.:|....|..|..|...|.....::..:.|.|.:: .|.|:..........|
Zfish   723 FMSSRKNTALVKNSKDGITRVLTTDYALLMESTSIEYITQRNCNLTQVGGLIDSKGYGVGTPIGS 787

  Fly   528 PYAELIKLSELRMLETG-VHFKHERSWMETKLHCYQHNHTVAVGLEYAAPLFIILLGAIILCMGI 591
            ||.:.:.::.|::.|.| :|...|:.|..............|:|:|....:||:|...::|.:.:
Zfish   788 PYRDKVTIAILQLQEEGKLHMMKEKWWRGNGCPEEDSKEASALGVENIGGIFIVLAAGLVLSVFV 852

  Fly   592 LGLEVIWHRH 601
            ...|.|:..|
Zfish   853 AIGEFIYKSH 862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 76/330 (23%)
Lig_chan 343..585 CDD:278489 59/272 (22%)
grik1aXP_009303592.1 Periplasmic_Binding_Protein_Type_1 37..432 CDD:299141 40/181 (22%)
ANF_receptor 57..398 CDD:279440 32/145 (22%)
Periplasmic_Binding_Protein_Type_2 446..815 CDD:304360 87/415 (21%)
Lig_chan 577..846 CDD:278489 64/292 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591211
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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