DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75b and grid1a

DIOPT Version :9

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:XP_021323097.1 Gene:grid1a / 793756 ZFINID:ZDB-GENE-120411-28 Length:1044 Species:Danio rerio


Alignment Length:710 Identity:142/710 - (20%)
Similarity:243/710 - (34%) Gaps:204/710 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LHNLILHNLIHMAKLSH-------------VLILHCSLSHLALLAQSKNIFTQFQPLHSDIQLND 55
            :|..:..||  .:|.||             :.::|.:|..:.::.|   ||    ||..|..:..
Zfish   240 IHQAVETNL--ASKDSHWVYANEEVSDTEIMELVHSALGRMTVIRQ---IF----PLWRDTNIRC 295

  Fly    56 DFLNHNILKLGVFLDINCDKS---------------GTVLDMASA--KRFFSHRYHWLIYDRSMN 103
            ...||.|..|      .||..               .:||.:|:|  ::....::|.:.....|.
Zfish   296 MRNNHRISSL------LCDPQEGYLQSLEVSSLYLYDSVLMLANAFYRKLEDRKWHSMASLNCMR 354

  Fly   104 FSVLESHFKEAQIFVDADVTYVTHDPFSKNFLLYDVYNKGRQLGGELNITADREIFCNKTNCRVE 168
            .|.                     .|::..:.:.|...|||..|    :|...:...|..|..|:
Zfish   355 KST---------------------KPWNGGWSMLDTIQKGRISG----LTGLMDFRSNGANSHVQ 394

  Fly   169 -RYLSELYTRS-------------------ALQHRKSFTGLTMRATAVVTALPLNVSIKEIFDFM 213
             ..|...|:.:                   :|:..::..|:......|||.|      :|.|..:
Zfish   395 FEILGTSYSETFGKDVKRLATWDSDRGLNGSLRENRADHGMQGITLKVVTLL------EEPFVMV 453

  Fly   214 NSKYRIQLDTYARLGYQARQPLRDMLDCKFK-YIFRD-RWSDGNATG---GMIGDLILDKADLAI 273
            ......|...|..........|..:|..|:: |...| ::......|   ||||:||..:||:||
Zfish   454 AENILGQPKRYKGFSIDVLDALAKILGFKYEMYQVADAKYGSPQTNGSWNGMIGELIGKRADVAI 518

  Fly   274 APFIYSFDRALFLQPITKFSVFREICMFRNPRSVSAGLSATE---------FLQPFSGGVWLTFA 329
            :....:.:|    :.:..||        :.....|.|:..|:         .|.||...||...|
Zfish   519 SAITITPER----ENVVDFS--------KRYLDYSVGILMTKTEERLNIFSLLAPFDLAVWACIA 571

  Fly   330 LLLLLAGCLLWVTFILER----RKQ-----WKPSLLTSCLLS-----FGAGCIQGAWLTPRSMGG 380
            ..:.:.|.::   |:|.|    |.|     .:|:.:|:...|     :||...||......||..
Zfish   572 AAIPVVGVMV---FLLRRVQSVRSQNPPGPHQPASVTTSFQSAIWIVYGAFVQQGGESFMSSMAL 633

  Fly   381 RMAFFALMVTSYLMYNYYTSIVVSKLLGQPIKSNIRTLQQLA-DSNLDVGI--EPTVYTRIYVE- 441
            |:|..:..:.:.::.:.||:.:.:.|....:.:.|||.|.|: .|.::.|.  |..|:....|: 
Zfish   634 RIAMGSWWLFTLIVCSSYTANLAAYLTVSRMDNAIRTFQDLSKQSEINYGTVRESAVFEYFRVKG 698

  Fly   442 ---TSEEPDVRDLYR-------------------KKVLGSKRSPDK-IWIPTEAGVLSVRDQEGF 483
               ..::....:|:|                   :||   ||.|.. :|........::.|.:..
Zfish   699 TNPLEQDSTFAELWRTINKNQGQDNSVTSPAEGIRKV---KRDPYAFLWDMAVLEYAALTDDDCT 760

  Fly   484 VYITG---VATGYEFVRKHFLAHQICELNEIPLRDASHTHTVLAKRSPYAELIKLSELRMLETGV 545
            :.:||   .:.||....:|                          .|||.:|.....|.:.|.|.
Zfish   761 LVVTGNGMSSKGYGLALQH--------------------------GSPYRDLFSQKILDLQEKGD 799

  Fly   546 HFKHERSWMETKLHCYQHNHTV------AVGLEYAAPLFIILLGAIILCMGILGLEVIWH 599
            ....::.|...|..|....|..      |:.|...|.:|.||...::|...:..||..|:
Zfish   800 LDILKQKWWPRKGRCDLDKHAEPQTEGRALRLHSFAGVFCILAAGLLLACLVAALESWWN 859

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 74/355 (21%)
Lig_chan 343..585 CDD:278489 60/291 (21%)
grid1aXP_021323097.1 Periplasmic_Binding_Protein_Type_1 25..424 CDD:324556 39/223 (17%)
PBP2_iGluR_delta_1 437..809 CDD:270448 88/421 (21%)
DNA_pol3_gamma3 <915..1044 CDD:331207
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591109
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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