DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75b and grin3a

DIOPT Version :9

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:XP_009303361.1 Gene:grin3a / 564832 ZFINID:ZDB-GENE-130530-780 Length:1111 Species:Danio rerio


Alignment Length:818 Identity:149/818 - (18%)
Similarity:254/818 - (31%) Gaps:339/818 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NLILHNLIHMAKLSHVLILHCSLSHLALLAQSKNIFTQFQPLHSDIQLNDDFLNHNILKLG---- 66
            |||. :|:.|.....|.::.|         |..||......||:    |..|....:||:.    
Zfish   256 NLIF-SLLSMNNWFDVSLVMC---------QQMNISDFVFLLHN----NSKFHLGTVLKISTNSS 306

  Fly    67 ------VFLDINC----DKSGTVL----DMASAKRFFS---------HRYHWLIYDRSMNFSVLE 108
                  :||....    |.:.|::    |:...:|.|:         ..|||:|.| |.|...|.
Zfish   307 SKNDFHIFLQAQLESIKDSTSTLVTFGCDIRDIRRIFTTIAKFGLILPDYHWIIGD-SQNVEELR 370

  Fly   109 SHFKEAQIFVDADVTYVTH----DPFSKNFLLYDVYNKGRQLGGELNITADREIFCNKTNC--RV 167
            :.        ...:..:.|    :|...:::...:....|.:|....::....:....|||  |:
Zfish   371 TE--------GLPMGLLAHGRMGEPSLDHYVQDALELVARAVGSAATVSPQLALIPGTTNCLARL 427

  Fly   168 E-----------RYLSELYTRSALQHRKSFTGLTMRATAVVTALPLNVSIKEIFDFMNSKYRIQL 221
            |           ||::.          .||.||    :..::....:..|.|...|:   :.:|.
Zfish   428 EAKNLTSGTFLSRYMAS----------TSFDGL----SGCISVQEESTIISESHHFI---WNLQH 475

  Fly   222 D-----TYARLG----------------------------------------------------- 228
            |     .:.|||                                                     
Zfish   476 DPIGKPMWTRLGSWKHGKVVMDYGVWPNKRRSQPGADWRHSSRLHLRVVTLVEHPFVFTRDVDDE 540

  Fly   229 -----------------------YQARQPLRDMLDCKFK------------------------YI 246
                                   :|..|...|.:..:||                        ||
Zfish   541 GLCPAGQLCLDPLTNDTALLESLFQGLQGANDTVPLEFKKCCYGYCIDLLEKLAEDMGFDFDLYI 605

  Fly   247 FRD---------RWSDGNATGGMIGDLILDKADLAIAPFIYSFDRAL---FLQPITKFSVFREIC 299
            ..|         ||:      |::|||:...|.||:..|..:..|:.   |..|.  ||....|.
Zfish   606 VGDGKYGAYKNGRWT------GLVGDLMSGAAHLAVTSFSINSARSQVIDFTSPF--FSTSLGIL 662

  Fly   300 MFRNPRSVSAGLSATEFLQPFSGGVWLTFALLLLLAGCLLWVTFILERRKQWK------------ 352
            :  ..|..:|.:.|  |:.|....:||...:       .|.||.:.....:||            
Zfish   663 V--RTRDTAAPIGA--FMWPLHWSMWLGIFV-------SLHVTAVFLTLYEWKSPFGMTPRGRNR 716

  Fly   353 ------PSLLTSC-LLSFGAGCIQGAWLTPRSMGGRM-----AFFALMVTSYLMYNYYTSIVVSK 405
                  .|.|..| .:.||.   ..|...|:...||.     |.|.|...|     .||:.:.:.
Zfish   717 DRVFSFSSALNVCYAILFGR---TAAIKPPKCWTGRFLMNLWAIFCLFCLS-----TYTANLAAV 773

  Fly   406 LLGQPIKSNIRTLQQLADSNLDVGI-EPTVY---------------TRIYVETSEEPDVRDLYRK 454
            ::|:      :|.:||:      || :|.::               ...||:.| .|::.:..|:
Zfish   774 MVGE------KTYEQLS------GIHDPKLHHPSQGFRFGTVRESSAEDYVKKS-FPEMHEYMRR 825

  Fly   455 KVLGSKRSPDKIWIPTEAGVLSVRDQ----EGFV---------------YITGVATGYEFVRKHF 500
              ..:..:||        |:..::|.    :.|:               ||:.:.|||....|..
Zfish   826 --YNAPTTPD--------GIDHLKDDPQKLDAFIMDKALLDYWAHADKXYISLLLTGYGIGLKQN 880

  Fly   501 --LAHQICELNEIPLRDASHTHTVLAKRSPYAELIKLSELRMLETGVHFKHERSWMETKLHCYQH 563
              |...|.||            ....|...:.:::.....:::..|     :||:..|:      
Zfish   881 SPLTSNISEL------------VSQYKSDGFMDMLHDKWYKVVPCG-----KRSFAVTE------ 922

  Fly   564 NHTVAVGLEYAAPLFIIL-LGAIILCMGILGLEVIWHR 600
              |:.:|:::.:.||::| :|..:..:..|| |.|.||
Zfish   923 --TLQMGIKHFSGLFVMLCVGVALSLLTTLG-EHIVHR 957

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 71/363 (20%)
Lig_chan 343..585 CDD:278489 55/303 (18%)
grin3aXP_009303361.1 Periplasmic_Binding_Protein_Type_1 36..502 CDD:299141 54/285 (19%)
ANF_receptor 132..452 CDD:279440 46/232 (20%)
PBP2_iGluR_NMDA_Nr3 518..908 CDD:270438 79/451 (18%)
Lig_chan 682..941 CDD:278489 59/321 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591234
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

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