DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75b and grik1b

DIOPT Version :9

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:XP_690040.5 Gene:grik1b / 561540 ZFINID:ZDB-GENE-070821-1 Length:906 Species:Danio rerio


Alignment Length:592 Identity:118/592 - (19%)
Similarity:211/592 - (35%) Gaps:147/592 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 HRYH-WLIYDRSMNFSVLESHFKEA-------QIFV----------DADVTYVTHD--------- 128
            ||:. |....|.:      |.||||       ||.:          |.|:..:..|         
Zfish   376 HRHKPWRFGSRFI------SMFKEAQWNGLTGQIIINKTDGLRKDFDLDIISLKEDGLEKPLESG 434

  Fly   129 PFSKNFLLYDVYNKGRQLGGELNIT-ADREIFCNKTNCRVERYL--SELYTRSALQHRKS----- 185
            .|:|.:....|:|...    .||:| ::::...|.|:....|.|  :.:.....:.::||     
Zfish   435 RFNKVWKKIGVWNSNT----GLNLTDSNKDKNTNVTDSMANRTLIVTTILENPYVMYKKSDKPLY 495

  Fly   186 ----FTGLTMRATAVVTALPLNVSIKEIFDFMNSKYRIQLDTYARLGYQARQPLRDMLDCKFKYI 246
                |.|..:..            :||:.:.:...|.::|.|..:.|.|                
Zfish   496 GNDRFEGYCLDL------------LKELSNILGFSYEVKLVTDGKYGAQ---------------- 532

  Fly   247 FRDRWSDGNATGGMIGDLILDKADLAIAPFIYSFDRALFLQPITKFSVFREICMFRNPRSVSAGL 311
                 :|.....||:.:||...||||:||...::.|...:.....|.......::..|...:.|:
Zfish   533 -----NDKGEWNGMVRELIDHVADLAVAPLTITYVREKVIDFSKPFMTLGISILYHKPNGTNPGV 592

  Fly   312 SATEFLQPFSGGVWLTFALLLLLAGCLLWVTFILERRKQWKP--------------SLLTSCLLS 362
            .:  ||.|.|..:|:...|..|...|:|:|.......:.:.|              :|:.|....
Zfish   593 FS--FLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLINSVWFG 655

  Fly   363 FGAGCIQGAWLTPRSM-----GGRMAFFALMVTSYLMYNYYTSIVVSKLLGQPIKSNIRTLQQLA 422
            .||...||:.|.|:::     ||...||.|::.|....|....:.|.::                
Zfish   656 VGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERM---------------- 704

  Fly   423 DSNLDVGIEPTVYTRIYVETSEEPDVRDLYRKKVLGSKRSPDKIWI---PTEAGVLSVRDQEGF- 483
            ||.:|...:....|:|......:......::|..:.:.   :|:|.   ..:...|...::||. 
Zfish   705 DSPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTY---EKMWAFMSSRKNTALVKNNREGIQ 766

  Fly   484 -VYITGVATGYEFVRKHFLAHQICELNEI-PLRDASHTHTVLAKRSPYAELIKLSELRMLETG-V 545
             |..|..|...|.....:::.:.|.|.:| .|.|:..........|||.:.:.::.|::.|.| :
Zfish   767 RVLTTDYALLMESTSIEYISQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKVTIAILQLQEEGKL 831

  Fly   546 HFKHERSWMETKLHCYQHNHTVAVGLEYAAPLFIILLGAIILCMGI------------LGLEVI- 597
            |...|:.|..............|:|:|....:||:|...::|.:.:            |.:|.: 
Zfish   832 HMMKEKWWRGNGCPEEDSKEASALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKSRKNLDIEEVS 896

  Fly   598 -----WH 599
                 ||
Zfish   897 VGQCEWH 903

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 70/325 (22%)
Lig_chan 343..585 CDD:278489 52/267 (19%)
grik1bXP_690040.5 Periplasmic_Binding_Protein_Type_1 62..455 CDD:299141 20/88 (23%)
ANF_receptor 80..423 CDD:279440 13/52 (25%)
Periplasmic_Binding_Protein_Type_2 471..840 CDD:304360 83/422 (20%)
Lig_chan 602..871 CDD:278489 58/287 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591210
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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