DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75b and grid1b

DIOPT Version :10

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:XP_009304811.1 Gene:grid1b / 557511 ZFINID:ZDB-GENE-121214-84 Length:1048 Species:Danio rerio


Alignment Length:692 Identity:138/692 - (19%)
Similarity:241/692 - (34%) Gaps:168/692 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LHNLILHNLIHMAKLSHVLILHCSLSHLAL--LAQSK----NIFTQFQPLHSDIQLNDDFLNHNI 62
            :|..:..||  .:|.||.:.::..:|...:  ||.|.    .:..|..||..|..::....:|.|
Zfish   240 IHQAVETNL--ASKDSHWVFVNEEISDTEILELAHSSLGRMTVVRQIFPLWRDSSVSCMRNSHRI 302

  Fly    63 LKLGVFLDINCDKSGTVLDMASAKRFFSHRYHWLIYDRSMNFSVLESHF------KEAQIFVDAD 121
            ..|      .||.....|........:       :||..:   :|.:.|      ::.......:
Zfish   303 SSL------LCDPQEGYLQSLEVSNLY-------LYDSVL---MLANAFYRKLEDRKWHSMASLN 351

  Fly   122 VTYVTHDPFSKNFLLYDVYNKGRQLGGELNITADREIFCNKTNCRVE-------------RYLSE 173
            ....:..|::..:.:.:...|||..|    :|...:...|.:|..|:             :.:..
Zfish   352 CIRKSTKPWNGGWSMLETIQKGRITG----LTGIMDFMENGSNSHVQFEILGTSFSETFGKDIKR 412

  Fly   174 LYT-------RSALQHRKSFTGLTMRATAVVTALPLNVSIKEIFDFMNSKYRIQLDTYARLGYQA 231
            |.|       ..:|:..:...|:......|||.|      ::.|..:......|...|.......
Zfish   413 LATWDSVHGLNGSLKESRIENGMQGVTVKVVTLL------EDPFVMVAENILGQPKRYKGFSIDV 471

  Fly   232 RQPLRDMLDCKFKY-IFR-------DRWSDGNATGGMIGDLILDKADLAIAPFIYSFDRALFLQP 288
            .:.|..:|.  ||| |::       .:.|:| :..||||:||..:||||::....:.:|...:..
Zfish   472 LEALAKILG--FKYDIYQVADSKYGSQLSNG-SWNGMIGELINKRADLAVSAITITPERENVVDF 533

  Fly   289 ITKFSVFREICMFRNPRSVSAGLSATEFLQPFSGGVWLTFALLLLLAGCLLWVTFILER----RK 349
            ..::..:....:.|.|..   .::......||...||...|..:.:.|.|:   |:|.|    |.
Zfish   534 SKRYMDYSVGILHRKPEE---KINIFSLFAPFDLAVWACIAAAIPVVGVLI---FLLTRMQMLRS 592

  Fly   350 QWKP----------SLLTSCLLSFGAGCIQG-----AWLTPRSMGGRMAFFALMVTSYLMYNYYT 399
            |..|          ||.::..:.:||...||     ..:..|.:.|....|.|:|.|....|...
Zfish   593 QNPPGAHHASSMSNSLHSAIWIVYGAFVQQGGDSVVGSVALRIVMGSWWLFTLIVCSSYTANLAA 657

  Fly   400 SIVVSKLLGQPIKSNIRTLQQLA-----------DSNL-----DVGIEPTVYTRIYVE---TSEE 445
            .:.||::     .:.|||.|.||           ||.:     ..|..|......|.|   |..:
Zfish   658 FLTVSRM-----DNTIRTFQDLARQMDFAYGTVRDSAVYDYFKAKGTNPLEQDSTYAELWRTISK 717

  Fly   446 PDVRDL--------YRKKVLGSKRSPDK-IWIPTEAGVLSVRDQEGFVYITG---VATGYEFVRK 498
            .:.:|.        .||    :|:.|.. :|........::.|.:..:.::|   .:.||....:
Zfish   718 NNGQDFSVSSPSEGIRK----AKKGPYAFLWDMAVVEYAALTDDDCTITVSGNSMSSKGYGIAMQ 778

  Fly   499 HFLAHQICELNEIPLRDASHTHTVLAKRSPYAELIKLSELRMLETGVHFKHERSWMETKLHCYQH 563
            |                          .|||.:||....|.:.|.|.....::.|......|..:
Zfish   779 H--------------------------GSPYRDLISQKILELQEKGDLDVLKQKWWPRTGRCDLN 817

  Fly   564 NHTVA------VGLEYAAPLFIILLGAIILCMGILGLEVIWH 599
            :|:.|      :.|...|.:|.||...::|...:..||:.|:
Zfish   818 SHSNAQPDGRSLKLHSFAGVFCILAAGLLLACLVAALEMWWN 859

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Lig_chan-Glu_bd <235..283 CDD:463166 18/55 (33%)
Periplasmic_Binding_Protein_Type_2 <259..>325 CDD:473866 15/65 (23%)
Lig_chan 343..584 CDD:459656 62/296 (21%)
grid1bXP_009304811.1 PBP1_iGluR_delta_1 25..426 CDD:380615 35/207 (17%)
Periplasmic_Binding_Protein_Type_2 437..809 CDD:473866 89/421 (21%)

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