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Protein Alignment Ir75b and Gria1

DIOPT Version :9

Sequence 1:	NP_001137966.2	Gene:	Ir75b / 8673994	FlyBaseID:	FBgn0261402	Length:	605	Species:	Drosophila melanogaster
Sequence 2:	NP_113796.1	Gene:	Gria1 / 50592	RGDID:	621531	Length:	907	Species:	Rattus norvegicus

Alignment Length:	442	Identity:	95/442 - (21%)
Similarity:	171/442 - (38%)	Gaps:	113/442 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly   208 EIFDFMNSKYRIQLDTYARLGYQARQPLRDMLDCKFKYIFRDRWSDGNATGGMIGDLILDKADLA 272
            ||...:...||:::.:..:  |.||.|                  |..|..||:|:|:..:||:|
  Rat   445 EIAKHVGYSYRLEIVSDGK--YGARDP------------------DTKAWNGMVGELVYGRADVA 489

  Fly   273 IAPFIYSFDRAL---FLQPITKFSVFREICMFRNPRSVSAGLSATEFLQPFSGGVWLTFALLLLL 334
            :||...:..|..   |.:|.....:   ..|.:.|:....|:.:  ||.|.:..:|:
  Rat   490 VAPLTITLVREEVIDFSKPFMSLGI---SIMIKKPQKSKPGVFS--FLDPLAYEIWM-------- 541

  Fly   335 AGCLLW-------VTFILERRK--QWKP------------------SLLTSCLLSFGAGCIQGAW 372
              |:::       |.|::.|..  :|..                  .:..|...|.||...||..
  Rat   542 --CIVFAYIGVSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQQGCD 604

  Fly   373 LTPRSMGGRMA-----FFALMVTSYLMYNYYTSIVVSKLLGQPIKSNIRTLQQLADSNLDVGIEP 432
            ::|||:.||:.     ||.|::.|     .||:.:.:.|..:.:.|.|.:.:.||..
  Rat   605 ISPRSLSGRIVGGVWWFFTLIIIS-----SYTANLAAFLTVERMVSPIESAEDLAKQ-------- 656

  Fly   433 TVYTRIYVETSEEPDVRDLYRKKVLGSKRSPDKIWI------------PTEAGVLSVRDQEG-FV 484
               |.|...|.|....::.:|:..:...   :|:|.            .||.|::.||..:| :.
  Rat   657 ---TEIAYGTLEAGSTKEFFRRSKIAVF---EKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYA 715

  Fly   485 YITGVATGYEFVRKHFLAHQICELNEIPLR-DASHTHTVLAKRSPYAELIKLSELRMLETGVHFK 548
            |:. .:|..|::.:    .:.|:..::... |:........|.|.....:.|:.|::.|.|:..|
  Rat   716 YLL-ESTMNEYIEQ----RKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLAVLKLNEQGLLDK 775

  Fly   549 HERSWMETKLHC-----YQHNHTVAVGLEYAAPLFIILLGAIILCMGILGLE 595
            .:..|...|..|     ...:.|.|:.|...|.:|.||:|.:.|.|.:..:|
  Rat   776 LKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIE 827

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.