DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75b and GluRIB

DIOPT Version :9

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_001261621.2 Gene:GluRIB / 44484 FlyBaseID:FBgn0264000 Length:1182 Species:Drosophila melanogaster


Alignment Length:861 Identity:152/861 - (17%)
Similarity:280/861 - (32%) Gaps:344/861 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 ILHCSLSHLALLAQSKNIFTQFQPLH-----------SDIQLNDDFLNHNILKLGVF------LD 70
            |::...||..|| :.:.|:...:|.:           |::.:..:|| |.:.::|.|      ||
  Fly   173 IIYLYDSHDGLL-RLQQIYQGLRPGNESFQVELVKRISNVSMAIEFL-HTLEQIGRFENKHIVLD 235

  Fly    71 INCDKSGTVL-----DMASAKRFFSHRYHWLIYDRSMN-----------------FSVLESHFKE 113
            ...:.:..:|     |:...:|    .||:|:....|:                 |.:::::.:.
  Fly   236 CPTEMAKQILIQHVRDLRLGRR----TYHYLLSGLVMDDRWESEIIEFGAINITGFRIVDTNRRL 296

  Fly   114 AQIFVDADVTYVTHDP------------------FSKNFLLYDVYNK------------------ 142
            .:.|.|   ::...||                  :...|:|.:.:||                  
  Fly   297 VREFYD---SWKRLDPQMSVGAGRESISAQAALMYDAVFVLVEAFNKILRKKPDQFRNNVQRRSQ 358

  Fly   143 -----------------------------------GRQLGGELNITADREIFCN---------KT 163
                                               |...||...: |.|.:.||         :.
  Fly   359 TLMVAQAAASTSSDGYNYSASGGGGGNGGAGGGFAGSDSGGSGGM-ASRALDCNTAKGWVNAWEH 422

  Fly   164 NCRVERYLSELYTRSALQHRKSFTGLT-----------MRATAVVTALPLNVSIKEIFDF----- 212
            ..::.|||.::          ...|||           :..|..|..:.:|.::.::.::     
  Fly   423 GDKISRYLRKV----------EIEGLTGDIKFNDDGRRVNYTLHVVEMTVNSAMVKVAEWNDDAG 477

  Fly   213 ---MNSKYRIQL-------------------DTYARL----------------GYQARQPLRDML 239
               :|:|| ::|                   :.|..|                ||  .:.|.|:|
  Fly   478 LQPLNAKY-VRLRPHVEFEKNRTYIVTTVLEEPYIMLKQVAFGEKLHGNNRFEGY--CKDLADLL 539

  Fly   240 --DCKFKYIFRDRWSDGN-------ATG---GMIGDLILDKADLAIAPFIYSFDRAL---FLQPI 289
              :....|..| ...|||       |.|   ||:|:|:..:||:|||....:.:|..   |.:|.
  Fly   540 AKELGINYELR-LVKDGNYGSEKSSAHGGWDGMVGELVRKEADIAIAAMTITAERERVIDFSKPF 603

  Fly   290 TKFSVFREICMFRNPRSVSAGLSATEFLQPFSGGVWLTFALLLLLAGCLLWVTFILER--RKQWK 352
            ....:   ..|.:.|...:.|:.:  |:.|.|..:|:  :::....|..: |.|.:.|  ..:|:
  Fly   604 MSLGI---SIMIKKPVKQTPGVFS--FMNPLSQEIWV--SVIFSYIGVSI-VLFFVSRFSPHEWR 660

  Fly   353 --------------------------PSLLTSCLL-------------SFGAGCIQGA------- 371
                                      |.::....|             :.||..:|.|       
  Fly   661 LVQQQPQQSQSPDPHAHHEQLANQQPPGIIGGAPLPAPPGPPTPGAQTAAGAAALQAALSAGSPG 725

  Fly   372 ------------------W------------LTPRSMGGRMA-----FFALMVTSYLMYNYYTSI 401
                              |            |:|||:.||:|     ||.|::.|....|....:
  Fly   726 SGGSSSAVVNEFSVWNSFWFSLAAFMQQGCDLSPRSVSGRIAAASWFFFTLILISSYTANLAAFL 790

  Fly   402 VVSKLLGQPIKSNIRTLQQLADSNLDVGIEPTVYTRIYVETSEEPDVRDLYRKKVLGSKRSPDKI 466
            .|.::: .||.|.    :.||           :.|.:...|.......|.:|:..:|..   :|:
  Fly   791 TVERMV-TPINSP----EDLA-----------MQTEVQYGTLLHGSTWDFFRRSQIGLH---NKM 836

  Fly   467 W----------IPT-EAGVLSVRDQEGFVYITGVATGYEFVRKHFLAHQICELNEIPLR-DASHT 519
            |          :|| :.|:..||:.:|...:...:...|:|.    |.:.|:..::... |....
  Fly   837 WEYMNSRKHVFVPTYDEGIKRVRNSKGKYALLVESPKNEYVN----AREPCDTMKVGRNLDTKGF 897

  Fly   520 HTVLAKRSPYAELIKLSELRMLETGVHFKHERSWMETKLHCYQH-----NHTVAVGLEYAAPLFI 579
            .......|...:.|.|:.|.:.|.|...|....|...|..|..|     :|: .:.|...|.:|.
  Fly   898 GIATPLGSALKDPINLAVLTLKENGELIKLRNKWWYEKAECSTHKDGETSHS-ELSLSNVAGIFY 961

  Fly   580 ILLGAIILCMGILGLE 595
            ||:|.:::.:.:..||
  Fly   962 ILIGGLLVSVFVAILE 977

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 79/407 (19%)
Lig_chan 343..585 CDD:278489 64/341 (19%)
GluRIBNP_001261621.2 PBP1_iGluR_AMPA 43..478 CDD:107375 47/324 (15%)
ANF_receptor 55..461 CDD:279440 46/307 (15%)
PBP2_iGluR_AMPA 497..938 CDD:270433 90/474 (19%)
Lig_chan 632..967 CDD:278489 67/361 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462520
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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