DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75b and CG11155

DIOPT Version :10

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster


Alignment Length:631 Identity:124/631 - (19%)
Similarity:220/631 - (34%) Gaps:166/631 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 HLALLAQSKNIFTQFQPLHSDIQLNDDFLNHNILKLGVFLDINCDKSGTV-----------LDMA 83
            |...|...:|.:.:.....||...||....:|.:...    |....:|||           ||:.
  Fly   330 HFLNLDNHQNFYIKNLSCTSDQTWNDGISLYNQINAA----ITDGLTGTVQFVEGRRNIFKLDIL 390

  Fly    84 SAKRFFSHRYHWLIYDRSMNFSVLESHFKEAQIFVDADVTYVTHDPFSKNFLLYDVYNKGRQLGG 148
            ..|:....:..:...|..:|.|       :...|.|:::..:|....::....|.:..:.:.|.|
  Fly   391 KLKQEKIQKVGYWHPDDGVNIS-------DPTAFYDSNIANITLVVMTREERPYVMVKEDKNLTG 448

  Fly   149 ELNITADREIFCNKTNCRVERYLSELYTRSALQHRKSFTGLTMRATAVVTALPLNVSIKEIFDFM 213
                           |.|.|.:..:|                               :|.|...:
  Fly   449 ---------------NLRFEGFCIDL-------------------------------LKAIATQV 467

  Fly   214 NSKYRIQLDTYARLGYQARQPLRDMLDCKFKYIFRDRWSDGNATGGMIGDLILDKADLAIAPFIY 278
            ..:|:|:|......|.               ||     .:.|:..|::.:|:..:||||:|....
  Fly   468 GFQYKIELVPDNMYGV---------------YI-----PETNSWNGIVQELMERRADLAVASMTI 512

  Fly   279 SFDRAL---FLQPITKFSVFREICMFRNPRSVSAGLSATEFLQPFSGGVWLTFALLLLLAGCLL- 339
            ::.|..   |.:|.....:.   .:|:.|.|....|.:  |:.|.:..:|     |.:||..:| 
  Fly   513 NYARESVIDFTKPFMNLGIG---ILFKVPTSQPTRLFS--FMNPLAIEIW-----LYVLAAYILV 567

  Fly   340 -WVTFILERRK--QWKP---------------SLLTSCLLSFGAGCIQGAWLTP-----RSMGGR 381
             :..|::.|..  :||.               |:..|.....|....||:.|.|     |.:||.
  Fly   568 SFALFVMARFSPYEWKNPHPCYKETDIVENQFSISNSFWFITGTFLRQGSGLNPKATSTRIVGGC 632

  Fly   382 MAFFALMVTSYLMYNYYTSIVVSKLLGQPIKSNIRTLQQLADSNLDVGIEPTVYTRIYVETSEEP 446
            ..||.|::.|....|....:.|.:::     |.|.:...||:.           |.|...|.|..
  Fly   633 WFFFCLIIISSYTANLAAFLTVERMI-----SPIESASDLAEQ-----------TEISYGTLEGG 681

  Fly   447 DVRDLYRKKVLGSKRSPDKIWIPTEAGVLSVRDQEGFV--YITGVAT----GYEFVRK----HFL 501
            .....:|...:|..:   |:|...|....:|     ||  |..|:..    .|.|:.:    .:.
  Fly   682 STMTFFRDSKIGIYQ---KMWRYMENRKTAV-----FVKTYEDGIKRVMEGSYAFLMESTMLDYA 738

  Fly   502 AHQICELNEI-PLRDASHTHTVLAKRSPYAELIKLSELRMLETG-VHFKHERSWMETKLHCYQHN 564
            ..:.|.|.:| .|.|:........|.||:.:.|.|:.|.:.|.| :...:::.|..|...|.:.:
  Fly   739 VQRDCNLTQIGGLLDSKGYGIATPKGSPWRDKISLAILELQEKGIIQILYDKWWKNTGDVCNRDD 803

  Fly   565 HTV-----AVGLEYAAPLFIILLGAIILCMGILGLEVIWHRHCTLH 605
            .:.     |:|:|....:|::||..:.|.:.:...|..|:....|:
  Fly   804 KSKESKANALGVENIGGVFVVLLCGLALAVVVAIFEFCWNSRKNLN 849

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Lig_chan-Glu_bd <235..283 CDD:463166 10/47 (21%)
Periplasmic_Binding_Protein_Type_2 <259..>325 CDD:473866 16/68 (24%)
Lig_chan 343..584 CDD:459656 62/279 (22%)
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..413 CDD:380605 18/93 (19%)
PBP2_iGluR_Kainate 424..793 CDD:270432 91/468 (19%)
Lig_chan 554..828 CDD:459656 67/302 (22%)

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