DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir75b and Ir60e

DIOPT Version :9

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_611927.3 Gene:Ir60e / 37917 FlyBaseID:FBgn0035019 Length:572 Species:Drosophila melanogaster


Alignment Length:674 Identity:128/674 - (18%)
Similarity:231/674 - (34%) Gaps:195/674 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LIHMAKLSHVLILHCSLSHLALLAQSKNIFTQ-FQPLHSDIQLNDDFLNHNILKLGVFLDINCDK 75
            :|.|.....|.:|.|    |...:.|:::..| .|.|:..:|          .:|.||:|..|..
  Fly     2 VIKMISFLLVSVLLC----LVGASDSESMQVQVLQDLNLALQ----------TELNVFIDFECCA 52

  Fly    76 SGTVLDMASAKRFFSHRYHWLIYDRSMNFSVL--ESHFKEAQIFV----DADVTYVTHDPFSKNF 134
            :..:|....:.|.       |:...|.....|  ..:|.|:.:.:    |:|:     :|...:.
  Fly    53 TSEILHKLDSPRI-------LLSSNSREARDLRIRGNFTESTLIIVSVMDSDL-----NPLVASL 105

  Fly   135 L--LYDVYNKGRQLGGELNITADREIFCNKTNCRVERYLSELYTRSALQHRKSFTG-LTMRATAV 196
            |  |.|..:       ||:|     :|.:.......:  .:|||..   .::.|.. :.|....:
  Fly   106 LPRLLDELH-------ELHI-----VFLSNEEPGFPK--QDLYTYC---FKEGFVNVILMSGKGL 153

  Fly   197 VTAL------PLNVS-IKEIFD-------FMNSKYRIQLDTYA--------------RLGYQARQ 233
            .:.|      |:::| :.|.||       |.....||...|.|              |.||.   
  Fly   154 YSYLPYPSIQPISLSNVSEYFDRARIIRNFQGFPVRILRSTLAPRDFEYSNEQGGLVRAGYL--- 215

  Fly   234 PLRDMLDCKFKYIFRDRWSDGNAT--GGMIGDLILDKADLAIAPFI---------YSFDRALFLQ 287
             ...:.:..::|         |||  ...|.||......||:|..:         |..|.:|.:.
  Fly   216 -FTAVKELTYRY---------NATIESVPIPDLPEYDVYLAVAEMLHTKKIDIVCYFKDFSLEVA 270

  Fly   288 PITKFSVFREICMFRNPRSVSAGLSATEFLQPFSGGVWLTFALLLLLAGCLLWVTFILERRKQWK 352
            .....|:.||..|..:.|.:|:.|   .:.:||.   |..:|:::   ..:|:.|.:|....:..
  Fly   271 YTAPLSIIREYFMAPHARPISSYL---YYSKPFG---WTLWAVVI---STVLYGTVMLHLAARGA 326

  Fly   353 PSLLTSCLLSFGAGCIQGAWLTPRSMGGR-MAFFALM-VTSYLMYNYYTSIVVSKLLGQPIKSNI 415
            ...:..|||...:..:.......|..|.| :|...:: :..:::.|.|.:.:.|.|.........
  Fly   327 RVEIGKCLLYSLSHILYNCHQKIRVAGWRDVAIHGILTIGGFILTNVYLATLSSILTSGLYDEEY 391

  Fly   416 RTLQQLADSNLDVGIEPTVYTRIYVETSEEPDVRD-LYRKKVLGSKRSPDKI---WIPTEAGVL- 475
            .||:.||                   .:..|.:.| .||.::......|:::   .:...|.:| 
  Fly   392 NTLEDLA-------------------RAPYPSLHDEYYRSQMKAKTFLPERLRRNSLSLNATLLK 437

  Fly   476 SVRD--QEGFVYITGVATGYE-------------------FVRK--HFLAHQICELNEIPLRDAS 517
            :.||  .:.::||.     ||                   .:|:  .|.....|..|.:|     
  Fly   438 AYRDGLNQSYIYIL-----YEDRLELILMQQYLLKTPRFNMIRQAVGFTLESYCVSNSLP----- 492

  Fly   518 HTHTVLAKRSPYAELIKLSELRMLETGVHFKHERSWMETKLHCYQHNHTV---------AVGLEY 573
                .||..|.:..       |:.|.|:..|.:.......:|  |..:|:         |..|:|
  Fly   493 ----YLAMTSEFMR-------RLQEHGISIKMKADTFRELIH--QGIYTLMRDDEPPAKAFDLDY 544

  Fly   574 AAPLFIILLGAIILCMGILGLEVI 597
            ....|::....:|..:.:...|::
  Fly   545 YFFAFVLWTVGLISSLLVFFAELV 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 66/340 (19%)
Lig_chan 343..585 CDD:278489 48/280 (17%)
Ir60eNP_611927.3 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.