DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75b and Ir56d

DIOPT Version :9

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_611432.1 Gene:Ir56d / 37252 FlyBaseID:FBgn0034458 Length:632 Species:Drosophila melanogaster


Alignment Length:627 Identity:123/627 - (19%)
Similarity:212/627 - (33%) Gaps:172/627 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 NFSVLESHFKEAQIFVDADVTYVTHDPFSKNFLLY-----DVYNKGRQ-----------LGGELN 151
            |..|||..::..|::            ..|||:.|     |:.||..|           :...|.
  Fly    29 NMFVLEMFYRITQLY------------HFKNFIFYISERLDLNNKDSQEFFHNFWTYFPMAPNLI 81

  Fly   152 ITADREIFCNKTNCRVERYLS-----------------EL--YTRSALQHRKS----FTGLTMR- 192
            ||.:..:     ...:.:::|                 ||  :.:..:...|:    |..|..| 
  Fly    82 ITREHHL-----GIPMMQFISTPSLVMVFTTGKDDPIMELASHNQQGIHWLKTIFVLFPSLQSRD 141

  Fly   193 -ATAVVTALPLNVSIKEIFDFMNSKYRIQ------------LDTYA------------------- 225
             .|...:.......||:::|::..|..|.            ||.|.                   
  Fly   142 FETNPESLAQFTAEIKDVYDWVWRKQFINTFLITIKDNVFILDPYPTPSIVNKTGVWQAEEFFHK 206

  Fly   226 ----RLGYQARQPLRDMLDCKFKYIFRDRWS---DGNATGGMIGDLIL----------------- 266
                ..||..|.|:...:...||   .||.:   :.|...|..|:|.|                 
  Fly   207 YAKNMKGYLVRTPILYDMPRVFK---SDRPTNRYEKNFIHGTSGNLFLGFLEFVNATLMDTSANV 268

  Fly   267 --------DKADLAIAPFIYSFDRALFLQPITKFSV-------FREICMFRNPRSVSAGLSATEF 316
                    :..|| ::..:|......|.:..|||.|       ..:.|:....|:.|   .|.::
  Fly   269 TADYLNMTNLLDL-VSQGVYETLIHSFTEITTKFVVSYSYPIGINDCCIMVPYRNQS---PADQY 329

  Fly   317 L-QPFSGGVWLTFALLLLLAGCLLWVTFILERRKQWKPSLLTSCLLSFGAGCIQGAWLTPRSMGG 380
            : :.....||:..:|..|.....:::...|..|......|.:.|.|::.....  ...|| ::..
  Fly   330 MHEALQENVWVLISLFTLYITVAIYLCSPLRPRDLSAAFLQSICTLTYSVPTF--IIRTP-TLRM 391

  Fly   381 RMAFFALMVTSYLMYNYYTSIVVSKLLGQPIKSNIRTLQQLADSNLDVGIEPTVYTRIYVETSEE 445
            |..:..|.:...:..|.|.|.:.|.....|....|.|:|.:.::||.:.:....|.|:.....:.
  Fly   392 RYLYILLAIWGIVTSNLYISRMTSYFTTAPPVRQINTVQDVVEANLRIKMLAIEYERMAKSPLQY 456

  Fly   446 PDVR----DLYRKKVLGSKRSPDKIWIPTEAGVLSVRDQEGFVYITGVATGYEFVRKH-FLAHQI 505
            |:..    ||..|.:|...|.|    ..|..|.....|:..|:.:..:     .:||. |...:|
  Fly   457 PESYLNQVDLVDKHMLDLHRDP----FNTSFGYTVSSDRWRFLNLQQL-----HLRKPIFRLTEI 512

  Fly   506 CE---LNEIPLRDASHTHTVLAKRSPYAELIKLSELRMLETGV--HFKHERSWMETKLH-CYQH- 563
            ||   .:..||...||..:|:      .|.|.:::    :.|:  |::.|..|....|| .:.| 
  Fly   513 CEGPFYHVFPLHKDSHMRSVM------TEYIMIAQ----QAGLMNHWERETFWEAVHLHRIHVHL 567

  Fly   564 --NHTVAVGLEYAAPLFIILLGAIILCMGILGLEVIWHRHCT 603
              :..:|:.|::.:.|.......:||.......|:.||.|.|
  Fly   568 FDDEPMALSLDFFSSLLRTWTLGLILAGLAFAAEMKWHEHVT 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 69/342 (20%)
Lig_chan 343..585 CDD:278489 55/255 (22%)
Ir56dNP_611432.1 ATPase-IIIA_H <312..422 CDD:273731 21/115 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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