DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75b and Ir56c

DIOPT Version :9

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_611431.1 Gene:Ir56c / 37251 FlyBaseID:FBgn0034457 Length:567 Species:Drosophila melanogaster


Alignment Length:659 Identity:139/659 - (21%)
Similarity:229/659 - (34%) Gaps:183/659 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LSHLA-LLAQ--SKNIFTQ---FQPLHSDIQLNDDFLNHNILKLGVFLDINCDKSG--TVLDMAS 84
            :.||. |||.  ..|:|.:   |...|..:...|:|:        :.:|....||.  ||::..:
  Fly     1 MQHLLNLLAPFGRMNVFQEIVWFVSPHQRLDQLDEFI--------MRIDEAFGKSATQTVVNNNT 57

  Fly    85 AKRFF---SHRYHWLIY------DRSMN-FS--VLESHFKEAQ-IFVD--AD-------VTYVTH 127
            ..|..   :.|.|....      |..|. ||  :|..||..:. |:||  .|       :|:..:
  Fly    58 EMRMIYSSARRNHMSFVFTTGAEDPIMKVFSKVLLGRHFYVSMVIYVDKVGDMHPIYDLLTFAYN 122

  Fly   128 DPFSKNFLLYDVYNKGRQLGGELNITADREIFCNKTNCRVERYLSELYTRSALQHRKSFTGLTMR 192
            ..|..:.:.::......||.|......  ..|.|:|:  ..:|:.:::.:  :|:.:|..|    
  Fly   123 QQFFNSMVHFESMEGVNQLFGVSKFPV--MSFENRTD--FLKYMGKIWKQ--VQNARSDVG---- 177

  Fly   193 ATAVVTALPLNVSIKEIFD----FMNSKYRIQLDTYAR---------------LGYQARQPLRDM 238
              ......||...:..:|.    :..|.||| ::|:.|               ||.|... ::|.
  Fly   178 --GFGFTTPLRQDLPHLFQSQGHYDGSTYRI-IETFVRFINGSFKELIMPPDSLGGQVIN-MKDA 238

  Fly   239 LDCKFKYIFRDRWSD--GNATGGMIGDLILDKADLAIAPFIYSFDRALFLQPITKFSVFREICMF 301
            |.     :.|:|..:  .:|....:.|..|:|:        |..   |.:|......::..:..:
  Fly   239 LQ-----LIRERKMEFCAHAYALFMSDEELEKS--------YPL---LVVQWCLMVPLYNSVSTY 287

  Fly   302 RNPRSVSAGLSATEFLQPFSGGVWLTFALLLLLAGCLL---WVTFILERRKQW---KPSLLTS-- 358
            ..|            ||||...||. |||..|||..||   |    |.....|   :.::|.|  
  Fly   288 FYP------------LQPFDWNVWF-FALGALLALVLLELMW----LRMFGGWSGYRGAVLNSFC 335

  Fly   359 --------------CLLSFGAGCIQGAWLTPRSMGGRMAFFALMVTSYLMYNYYTSIVVSKLLGQ 409
                          |||.|                  :....:....:.:..||||.:.|.|...
  Fly   336 YIINVPIEGQLQQPCLLRF------------------LLLATVFFHGFFLSAYYTSNLGSILTVN 382

  Fly   410 PIKSNIRTLQQLADSNLDVGI---EPTVYTRIYVETSEEPDVRDLYRKKVLGSKRSPDKIWIPTE 471
            ...:.|.|:..:..:.|.|.|   |......:..|..:|  ..:|.|               |.:
  Fly   383 LFHAQINTMNDIVSAQLPVMIIDYEMEFLLNLNKELPQE--FLELLR---------------PVD 430

  Fly   472 AGVLSVRD---QEGFVYITGVATGYEFV---RKHFLAHQICELNEIPLRDASHTHTVLAKRSPYA 530
            :.|.|...   ...|.|.. ....:||:   :|| |..::.:|:.|.. .:.|....|...|...
  Fly   431 SAVFSEHQTSFNSSFAYFV-TEDHWEFLDEQQKH-LKQRLFKLSSICF-GSYHLAFPLQMDSSLW 492

  Fly   531 ELIKLSELRMLETGVHFKHERSWMETKLHC-------YQHNHTVAVGLEYAAPLFIILLGAIILC 588
            ..|:....|:..:|:...:.||...:.||.       ....:|.| ||::.|..||:||....|.
  Fly   493 RDIEYFTFRIHSSGLLNFYARSSFGSALHAGLVQRMPDTQEYTSA-GLQHLAIAFILLLVMSFLA 556

  Fly   589 MGILGLEVI 597
            ..:..||.:
  Fly   557 GIVFVLETL 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 66/332 (20%)
Lig_chan 343..585 CDD:278489 55/276 (20%)
Ir56cNP_611431.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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