DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir75b and Ir40a

DIOPT Version :9

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster


Alignment Length:721 Identity:146/721 - (20%)
Similarity:259/721 - (35%) Gaps:209/721 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SHLALLA------------QSKNIFTQ--FQPLH---------SDIQLNDDFLNHNILKLGVFLD 70
            |.||:||            :.:|::..  .|.||         |..:|....:..|:......:.
  Fly    46 SSLAILALPSLALSDGVCQKERNVYLDDFLQRLHRSNYKSVVFSQTELFFQHIEENLQGANECIS 110

  Fly    71 INCDKSGTVLDMASAKRFFSHRYHWLIYDRSMNF--SVLESHFKEAQIFVDADVTYVTHDPFSKN 133
            :..|:...:|: :...|...||....|:.....:  |.....|:|     ...|..||. |..|.
  Fly   111 LILDEPNQLLN-SLHDRHLGHRLSLFIFYWGARWPPSSRVIRFRE-----PLRVVVVTR-PRKKA 168

  Fly   134 FLLYDVYNKGRQLGGELNITADREI----FCNKTNCRVERYLSELYTRSALQHRKSFTGLTMRAT 194
            |.:|  ||:.|.       .:|.::    :.:..|..::| :..|.|  ||....:|.|.|.|..
  Fly   169 FRIY--YNQARP-------CSDSQLQLVNWYDGDNLGLQR-IPLLPT--ALSVYANFKGRTFRVP 221

  Fly   195 AV-------VTALPLNVSIKEIFDFMNSKYRIQLDTYARLGYQARQPLRDMLDCKFKYIFRD--- 249
            ..       ||....:....|.|:.::|..:.::.......::....|...::.:||||...   
  Fly   222 VFHSPPWFWVTYCNNSFEEDEEFNSLDSIEKRKVRVTGGRDHRLLMLLSKHMNFRFKYIEAPGRT 286

  Fly   250 ----RWSDG-----NATGGMIGDLILDKADLAIAPFIYSFDRALFLQPITKFSVF--REICMFRN 303
                |..||     :.||| ||.|...:||..:.....|::|    :...:||.|  .:...|..
  Fly   287 QGSMRSEDGKDSNDSFTGG-IGLLQSGQADFFLGDVGLSWER----RKAIEFSFFTLADSGAFAT 346

  Fly   304 --PRSVSAGLSATEFLQPFSGGVWLTFALLLLLAGCLLW----VTFILERR-------------- 348
              ||.::..|:   .::||...:|....|.::.:|.:.:    :.:|..||              
  Fly   347 HAPRRLNEALA---IMRPFKQDIWPHLILTIIFSGPIFYGIIALPYIWRRRWANSDVEHLGELYI 408

  Fly   349 -----KQWKPSLL---TSCLLS-------FGAGCIQGAWLTPRSM----------GGRMAFFAL- 387
                 |:..|.||   ...:||       ....||   |.|.|..          |.|..|..: 
  Fly   409 HMTYLKEITPRLLKLKPRTVLSAHQMPHQLFQKCI---WFTLRLFLKQSCNELHNGYRAKFLTIV 470

  Fly   388 --MVTSYLMYNYYTSIVVSKLLGQPIKSNIRTLQQLADSNLDVGIEPTVYTRIYVETSEEPDV-- 448
              :..:|::.:.|::.:.|:......:..|.|||:|..:.:..|.      |:||| .|...:  
  Fly   471 YWIAATYVLADVYSAQLTSQFARPAREPPINTLQRLQAAMIHDGY------RLYVE-KESSSLEM 528

  Fly   449 --------RDLY---RKKVLGSKRSPDKIWIPT-EAGVLSVRD---------------------- 479
                    |.||   |::|:   ..|...:|.: |||:..:.:                      
  Fly   529 LENGTELFRQLYALMRQQVI---NDPQGFFIDSVEAGIKLIAEGGEDKAVLGGRETLFFNVQQYG 590

  Fly   480 -------QEGFVYITGVAT--GYEFVRKHFLAHQICELNEIPLRDASHTHTVLAKRSPYAELIKL 535
                   |:.:...:.||.  |..|:..  |.:.:.:|.|..:.| ..|....||:  |.|   :
  Fly   591 SNNFQLSQKLYTRYSAVAVQIGCPFLGS--LNNVLMQLFESGILD-KMTAAEYAKQ--YQE---V 647

  Fly   536 SELRMLETGVHFKHERSWMETKLHCYQHNHTVAVGLEYAAPLFIILLGAIILCMG--------IL 592
            ...|:.:..|..|:..::..|:    .::.||      .:||.:.:|....:.:|        ||
  Fly   648 EATRIYKGSVQAKNSEAYSRTE----SYDSTV------ISPLNLRMLQGAFIALGVGSLAAGVIL 702

  Fly   593 GLEVIW 598
            .||:::
  Fly   703 LLEIVF 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 82/399 (21%)
Lig_chan 343..585 CDD:278489 64/328 (20%)
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233 28/126 (22%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725 22/101 (22%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 30/153 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462761
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

Return to query results.
Submit another query.