DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75b and Ir25a

DIOPT Version :9

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster


Alignment Length:607 Identity:103/607 - (16%)
Similarity:208/607 - (34%) Gaps:191/607 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 LESHFKEAQIFVDADVTYVTHD-------PFS-KNFLLYDVYNKGRQLGGELNITADREIFCNKT 163
            |..:|.:    :....:|.|.|       ||: .:|:.:::.....|:.|..::.:.        
  Fly   359 LRDYFTK----ITEPTSYGTFDLVTQSTQPFNGHSFMKFEMDINVLQIRGGSSVNSK-------- 411

  Fly   164 NCRVERYLSELYTRSALQHRKSFTGLTMRATAVVTALPLNVSIKEIFDFMNSKYRIQLDTYARLG 228
              .:.:::|.|.:...::..:....||..            ::..||..:.:.: |..|..|..|
  Fly   412 --SIGKWISGLNSELIVKDEEQMKNLTAD------------TVYRIFTVVQAPF-IMRDETAPKG 461

  Fly   229 YQA---------------RQPLRDMLDCKFKYIFRD-RWSDGNATGGMIGDLILDKADLAIAPFI 277
            |:.               ...::::.|.||..:..: :|:      |::..|:..:||:.:....
  Fly   462 YKGYCIDLINEIAAIVHFDYTIQEVEDGKFGNMDENGQWN------GIVKKLMDKQADIGLGSMS 520

  Fly   278 YSFDRALFLQ-PITKFSVFREICMFRNPRSVSAGLSATEFLQPFSGGVWLTFALLLLLAGCLLWV 341
            ...:|.:.:. .:..:.:.....|.:.|.|.|   |..:||......|||...........|:| 
  Fly   521 VMAEREIVIDFTVPYYDLVGITIMMQRPSSPS---SLFKFLTVLETNVWLCILAAYFFTSFLMW- 581

  Fly   342 TFILERRKQWKP----------------------SLLTSCLLSFGAGCIQGAWLTPRSMGGRMAF 384
              |.:|   |.|                      ..|..|:.|...   ||....|:::.||:..
  Fly   582 --IFDR---WSPYSYQNNREKYKDDEEKREFNLKECLWFCMTSLTP---QGGGEAPKNLSGRLVA 638

  Fly   385 FALMVTSYLMYNYYTSIVVSKLLGQPIKSNIRTLQQLAD---------------------SNLDV 428
            ....:..:::...||:.:.:.|....:.:.:.:|..||.                     ||:: 
  Fly   639 ATWWLFGFIIIASYTANLAAFLTVSRLDTPVESLDDLAKQYKILYAPLNGSSAMTYFERMSNIE- 702

  Fly   429 GIEPTVYTRIYVETSEEPDVRDLYRKKV------LGSKRSPDKIW-------IPT--EAGVLSVR 478
                .::..|:.:.|....:..:.|.|:      :..|.:  |:|       :|.  :..|..||
  Fly   703 ----QMFYEIWKDLSLNDSLTAVERSKLAVWDYPVSDKYT--KMWQAMQEAKLPATLDEAVARVR 761

  Fly   479 DQ---EGFVYITGVAT---------------GYEFVRKHFLAHQICELNEIPLRDASHTH----- 520
            :.   .||.:: |.||               |.||.||.:         .|.::..||..     
  Fly   762 NSTAATGFAFL-GDATDIRYLQLTNCDLQVVGEEFSRKPY---------AIAVQQGSHLKDQFNN 816

  Fly   521 ---TVLAKRSPYAELIKLSELRMLETGVHFKHERSWM--ETKLHCYQ-HNHTVAVGLEYAAPLFI 579
               |:|.||       :|.:|:          |:.|.  |....|.: .:.:..:.::....:||
  Fly   817 AILTLLNKR-------QLEKLK----------EKWWKNDEALAKCDKPEDQSDGISIQNIGGVFI 864

  Fly   580 ILLGAIILCMGILGLEVIWHRH 601
            ::...|.:....|..|..|:|:
  Fly   865 VIFVGIGMACITLVFEYWWYRY 886

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 68/384 (18%)
Lig_chan 343..585 CDD:278489 56/328 (17%)
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 40..426 CDD:107378 12/80 (15%)
PBP2_iGluR_putative 438..836 CDD:270435 79/462 (17%)
Lig_chan 565..870 CDD:278489 61/347 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462809
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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