DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir75b and Ir94c

DIOPT Version :9

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_732701.2 Gene:Ir94c / 318727 FlyBaseID:FBgn0051423 Length:604 Species:Drosophila melanogaster


Alignment Length:607 Identity:118/607 - (19%)
Similarity:201/607 - (33%) Gaps:187/607 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 YVTHDPFSKN----FL--LYDVYNKGRQLGGELNITADREIFCN------------KTN----CR 166
            |::....|||    ||  |.:|..:||::...:.|...|:.:|:            :||    .|
  Fly    14 YLSLTKGSKNPQLKFLRELINVIEEGREIRTIMVIKHSRDEYCHLDQWNPRGSPILRTNEMGSIR 78

  Fly   167 VERYLSELYTRSALQHRKSFTGL---------TMRATAVVT-----------------------A 199
            :..|.::.....|.....|..||         .||...::.                       |
  Fly    79 ISGYFNDQAVILACMGENSDYGLLKSLANAMDNMRQERIILWSEREPTKMLMDYISQQADRYNFA 143

  Fly   200 LPLNVSIKEIFDFMNSKYRIQLDTY---------------------ARLGYQARQ---------- 233
            ..:.|::.|..|.:.|.:  ||:.|                     ..|.:|.:.          
  Fly   144 QIIIVTMNEDVDAVPSLH--QLNPYPTPRFRQITNISNIRRTSFFGCGLSFQGKTAILKESVVSN 206

  Fly   234 ------------PLRDMLDCKF-----KYIFRDRWSDGNATGGMIGDLILDKADLAIAPFIYSFD 281
                        ||.::.|.:.     ||....:..|.|.:..       |..|:.:.|...:.|
  Fly   207 IRFKVWSPSGPIPLSELKDYEIVQFAVKYNLSLKLYDQNESKS-------DHFDIQLGPLFITKD 264

  Fly   282 ---RALFLQPITKFSVFREICMFRNPR----SVSAGLSATEFLQPFSGGVWLTFALLLLLAGCLL 339
               :..|:.|.|..|:.  :.:..:|:    .|...|...:.:    |.:.:.:|:.:|:...:|
  Fly   265 FPTQMAFVSPNTACSLI--VIVPCSPKWRFMDVLHKLGVLKLI----GCLLIAYAVFVLIETLIL 323

  Fly   340 WVTFILERRKQWKPSLLTSCLLSFGAGCIQGAWLTPRSMGG----------------RMAFFALM 388
            |:|..:..|:....||              ...|.||:..|                |..|..:.
  Fly   324 WLTHRISGREVRLTSL--------------NQLLNPRAFRGILGLPFPEFRRSSISLRQLFLVIS 374

  Fly   389 VTSYLMYNYYTSIVVSKLLGQPIKS-NIRTLQQLADSNLDVGIEPTVYTRIYVETSEEPDVRD-- 450
            |.. |:|:.:.|..:|.||.:|.:: .:|..::|.||.|...::.  ||..::|...:|:..|  
  Fly   375 VFG-LVYSNFVSCTLSALLTKPAQNPQVRNFKELRDSGLITIMDK--YTHSFIEKHIDPEFFDHV 436

  Fly   451 LYRKKVLGSKRSPDKIWIPTEAGVLSVRDQEGFVYITGVATGYEFVRKHFLAHQICELNEIPLRD 515
            |....:|..|.:...||        :..|...:|..|........|:|.|.....||...:.:..
  Fly   437 LPHYLILQKKEALRMIW--------NFNDSYSYVMYTTTWKSLNTVQKSFDERVFCESESLTIAW 493

  Fly   516 ASHTHTVLAKRSPYAELIKLSELRMLETGVHFKHERSWME--TKLHCYQHNHTVAVGL-EYAAPL 577
            ......||...|....::......|.:||:    ..||.|  .|:....:|.|....: |.|.||
  Fly   494 NLPRMYVLGNNSVLKWMLSRYITYMPQTGI----PDSWTEQLPKVLKLLYNVTSPRRIKEGAVPL 554

  Fly   578 FIILLGAIILCMGILGLEVIWH 599
                        .|..|..|||
  Fly   555 ------------SIQHLSWIWH 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 65/325 (20%)
Lig_chan 343..585 CDD:278489 56/263 (21%)
Ir94cNP_732701.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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