DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75b and GRIN2D

DIOPT Version :9

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_000827.2 Gene:GRIN2D / 2906 HGNCID:4588 Length:1336 Species:Homo sapiens


Alignment Length:402 Identity:93/402 - (23%)
Similarity:155/402 - (38%) Gaps:106/402 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   259 GMIGDLILDKADLAIAPFIYSFDRALFLQPITKFSV-FRE----ICMFRNPRSVSAGLSATEFLQ 318
            ||||::...:||:||.....:.:|:    .|..||| |.|    :.:.|:..:|    |.:.||:
Human   523 GMIGEVFYQRADMAIGSLTINEERS----EIVDFSVPFVETGISVMVARSNGTV----SPSAFLE 579

  Fly   319 PFSGGVWLTFALLLLLAGCLLWV---TFILERRKQ--WKPSLLTSCL---LSFGAGCIQGAWL-- 373
            |:|..||     :::...||..|   .||.|....  :..||.|...   .:|..|  :..||  
Human   580 PYSPAVW-----VMMFVMCLTVVAVTVFIFEYLSPVGYNRSLATGKRPGGSTFTIG--KSIWLLW 637

  Fly   374 -----------TPRSMGGRM-----AFFALMVTSYLMYNYYTSIVVSKLLGQPIKSNIRTLQQLA 422
                       .||....::     ||||::..:     .||:.:.:.::.:   ..:.|:..|:
Human   638 ALVFNNSVPVENPRGTTSKIMVLVWAFFAVIFLA-----SYTANLAAFMIQE---EYVDTVSGLS 694

  Fly   423 DSN----------LDVGIEPTVYTRIYVETSEEPDVR----DLYRKKVLGSKRSPDKIWIPTEAG 473
            |..          |..|..|        ..|.|.::|    |::...|..::...::.....:||
Human   695 DRKFQRPQEQYPPLKFGTVP--------NGSTEKNIRSNYPDMHSYMVRYNQPRVEEALTQLKAG 751

  Fly   474 VLSVRDQEGFVYITGVATGYEFVRKHFLAH--QICELNEIPLRDASHT---HTVLAKRSPYAELI 533
            .|     :.|:|...|.        :::|.  :.|:|..|.......|   ...|.|.|.:...|
Human   752 KL-----DAFIYDAAVL--------NYMARKDEGCKLVTIGSGKVFATTGYGIALHKGSRWKRPI 803

  Fly   534 KLSELRMLETGVHFKHERSWMETKLHCYQHNHTVAV-----GLEYAAPLFIILLGAIILCMGILG 593
            .|:.|:.|........||.|:..  .|  ||..:.|     .::..|.:|.:||.|:.|.:.:..
Human   804 DLALLQFLGDDEIEMLERLWLSG--IC--HNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFA 864

  Fly   594 LE--VIWH-RHC 602
            .|  |.|. |||
Human   865 WEHLVYWRLRHC 876

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 76/343 (22%)
Lig_chan 343..585 CDD:278489 58/288 (20%)
GRIN2DNP_000827.2 PBP1_iGluR_NMDA_NR2 49..413 CDD:380601
PBP2_iGluR_NMDA_Nr2 430..830 CDD:270436 78/354 (22%)
Glutamate binding. /evidence=ECO:0000250|UniProtKB:Q00959 539..541 0/1 (0%)
Pore-forming. /evidence=ECO:0000250|UniProtKB:Q00960 631..650 2/18 (11%)