DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir75b and GRIN2C

DIOPT Version :9

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:XP_016880033.1 Gene:GRIN2C / 2905 HGNCID:4587 Length:1337 Species:Homo sapiens


Alignment Length:474 Identity:93/474 - (19%)
Similarity:173/474 - (36%) Gaps:139/474 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 IKEIFDFMNSKYRIQLDTYARLGYQARQPLRDMLDCKFKYIFRDRWSDGNATGGMIGDLILDKAD 270
            :|::...:...|.:.|.|..:.|.:.                |..|:      ||||::...:||
Human   537 LKKLARVVKFSYDLYLVTNGKHGKRV----------------RGVWN------GMIGEVYYKRAD 579

  Fly   271 LAIAPFIYSFDRALFLQPITKFSV-FRE----ICMFRNPRSVSAGLSATEFLQPFSGGVWLTFAL 330
            :||.....:.:|:    .|..||| |.|    :.:.|:..:|    |.:.||:|:|..||     
Human   580 MAIGSLTINEERS----EIVDFSVPFVETGISVMVARSNGTV----SPSAFLEPYSPAVW----- 631

  Fly   331 LLLLAGCLLWVTFILERRKQWKPSLLTSCLLSFGAGCIQG-------------AWL--------- 373
            :::...||..|...:...:.:.|       :|:.....:|             .||         
Human   632 VMMFVMCLTVVAITVFMFEYFSP-------VSYNQNLTRGKKSGGPAFTIGKSVWLLWALVFNNS 689

  Fly   374 ----TPRSMGGRM-----AFFALMVTSYLMYNYYTSIVVSKLLGQPIKSNIRTLQQLADSNL--- 426
                .||....::     ||||::..:     .||:.:.:.::.:   ..|.|:..|:|...   
Human   690 VPIENPRGTTSKIMVLVWAFFAVIFLA-----SYTANLAAFMIQE---QYIDTVSGLSDKKSLHL 746

  Fly   427 -DVGIEPTVYTRIYVETSEEP-----------------------DVRDLYRKKVLGSKRSPD--- 464
             :.|:..|.:.....:..:.|                       :.||::...|..::||.:   
Human   747 ENTGVAWTAFKTFCSDYFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMHTHMVKFNQRSVEDAL 811

  Fly   465 -KIWIPTEAGVLSVRDQEGFVYITGVATGYEFVRKHFLA--HQICELNEIPLRDASHT---HTVL 523
             .:.:.:||..:. |..:.|:|...|.        :::|  .:.|:|..|.......|   ...:
Human   812 TSLKMGSEAQPVP-RKLDAFIYDAAVL--------NYMAGKDEGCKLVTIGSGKVFATTGYGIAM 867

  Fly   524 AKRSPYAELIKLSELRMLETGVHFKHERSWMETKLHCYQHNHTV---AVGLEYAAPLFIILLGAI 585
            .|.|.:...|.|:.|:.|..|...|.|..|:..  .|....:.|   .:.::..|.:|.:||.|:
Human   868 QKDSHWKRAIDLALLQFLGDGETQKLETVWLSG--ICQNEKNEVMSSKLDIDNMAGVFYMLLVAM 930

  Fly   586 ILCMGILGLE--VIWH-RH 601
            .|.:.:...|  |.|. ||
Human   931 GLALLVFAWEHLVYWKLRH 949

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 72/371 (19%)
Lig_chan 343..585 CDD:278489 52/311 (17%)
GRIN2CXP_016880033.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155925
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.