DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75b and GRIK5

DIOPT Version :9

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:XP_011525167.1 Gene:GRIK5 / 2901 HGNCID:4583 Length:982 Species:Homo sapiens


Alignment Length:675 Identity:154/675 - (22%)
Similarity:258/675 - (38%) Gaps:148/675 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KLSHVLI-LHCSLSHLALLAQS---------KNIFT--QFQPLHSDIQLNDDFLNHNILKLGVF- 68
            |:|.::| .:.|:|||.|...|         |.|.|  .|..||.|..:.|   :.|||...:| 
Human   210 KVSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFPILHLDGIVED---SSNILGFSMFN 271

  Fly    69 ------------LDI----NCDKSGTVLDMASAKRFFSHRYHWLI-----YDRSMNFSVLESHFK 112
                        |::    ||:.| |.|..|.:........|.::     .:||....|......
Human   272 TSHPFYPEFVRSLNMSWRENCEAS-TYLGPALSAALMFDAVHVVVSAVRELNRSQEIGVKPLACT 335

  Fly   113 EAQIFVDADVTYVTHDPFSKNFLLYDVYN--KGRQLGGELNITADREIFCNKTNCRVERYLSELY 175
            .|.|:        .|.....|:|....|:  .||.   |.|....|      ||     |...:.
Human   336 SANIW--------PHGTSLMNYLRMVEYDGLTGRV---EFNSKGQR------TN-----YTLRIL 378

  Fly   176 TRSALQHRKSFTGLTMRATAV-VTALPLNVS------IKEIFDFMNSKYRIQLDTYARLGYQAR- 232
            .:|...||:.....:.|..|: .|.|.:|:|      ...:...:.:.|.::...:..|....| 
Human   379 EKSRQGHREIGVWYSNRTLAMNATTLDINLSQTLANKTLVVTTILENPYVMRRPNFQALSGNERF 443

  Fly   233 -----QPLRDMLD-CKFKYIFR-------------DRWSDGNATGGMIGDLI-LDKADLAIAPFI 277
                 ..||::.: .:|:|..|             ..|:      ||:|:|| ..|||||:|.|.
Human   444 EGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNGSWT------GMVGELINRQKADLAVAAFT 502

  Fly   278 YSFDRAL---FLQPITK--FSVFREICMFRNPRSVSAGLSATEFLQPFSGGVWLTFALLLLLAGC 337
            .:.:|..   |.:|...  .|:...:.|.|.|...|       ||.|||..|||...|..|...|
Human   503 ITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFS-------FLDPFSPAVWLFMLLAYLAVSC 560

  Fly   338 LLWVTFILERRKQWKP---------------SLLTSCLLSFGAGCIQGAWLTPRSMGGR------ 381
            :|::...|...:.:.|               :|..|.....|....||:.:.||::..|      
Human   561 VLFLAARLSPYEWYNPHPCLRARPHILENQYTLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVW 625

  Fly   382 MAFFALMVTSYLMYNYYTSIVVSKLLGQPIKSNIRTLQQLAD-SNLDVGIEPTVYTRIYVETSEE 445
            .||..::::|      ||:.:.:.|..|.::..:.:...||| :|::.|......|..:.:.|..
Human   626 WAFTLIIISS------YTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQNSRY 684

  Fly   446 PDVRDLYRKKVLGSKRSPDKIWIPTEAGVLSVRDQEGFVYITGVATGYEFVRKHFLAHQICELNE 510
            ...:.::  ..:.||: |......||.|:..|.:.. :.::. .:|..|:.|:     ..|.|.:
Human   685 QTYQRMW--NYMQSKQ-PSVFVKSTEEGIARVLNSR-YAFLL-ESTMNEYHRR-----LNCNLTQ 739

  Fly   511 I-PLRDASHTHTVLAKRSPYAELIKLSELRMLETGVHFKHERSWMETKLHCYQHNHTV-AVGLEY 573
            | .|.|.......:...||:.:.|.|:.|::.|.......:|.|.|......:.:|.. .:|:|.
Human   740 IGGLLDTKGYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKEEDHRAKGLGMEN 804

  Fly   574 AAPLFIILLGAIILCMGILGLEVIW 598
            ...:||:|:..:|:.:.:..:|.||
Human   805 IGGIFIVLICGLIIAVFVAVMEFIW 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 78/328 (24%)
Lig_chan 343..585 CDD:278489 54/265 (20%)
GRIK5XP_011525167.1 PBP1_iGluR_Kainate_KA1_2 25..399 CDD:107389 50/214 (23%)
ANF_receptor 42..379 CDD:279440 46/194 (24%)
Periplasmic_Binding_Protein_Type_2 414..785 CDD:304360 88/399 (22%)
Lig_chan 546..816 CDD:278489 61/285 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155934
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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