DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75b and GRIK4

DIOPT Version :10

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_055434.2 Gene:GRIK4 / 2900 HGNCID:4582 Length:956 Species:Homo sapiens


Alignment Length:713 Identity:161/713 - (22%)
Similarity:267/713 - (37%) Gaps:163/713 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLQLHNLILHNLIHMAKLSHVLILHCSLSHLALLAQSKNIFTQFQPLHSDIQLNDDFLNHNILKL 65
            :|.|..|:...||....|| |.:|..:.....||.:.::..|....:|::..     ::|.||  
Human   172 LLNLEKLLRQFLISKDTLS-VRMLDDTRDPTPLLKEIRDDKTATIIIHANAS-----MSHTIL-- 228

  Fly    66 GVFLDINCDKSGTVLDMASA--------KRFFSHRYHWLIYDR--SMNFSVL-ESH--FKE-AQI 116
                     .....|.|.||        ..|...|...|:.||  .:.||:. :||  |:| ||.
Human   229 ---------LKAAELGMVSAYYTYIFTNLEFSLQRMDSLVDDRVNILGFSIFNQSHAFFQEFAQS 284

  Fly   117 FVDADVTYVTHDPFS----KNFLLYD-VY---------NKGRQLGGELNITADREIFCNKTNCRV 167
            ...:......|.||:    .:.||:| ||         |:.:::|.:.......:|:.:.|:...
Human   285 LNQSWQENCDHVPFTGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMN 349

  Fly   168 ERYLSEL-----------------YTRSALQH-RKSF---------TGLTM-------------- 191
            ...:.||                 |....||. |..|         .||:|              
Human   350 YLRMVELEGLTGHIEFNSKGQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSHLYASNISDTLF 414

  Fly   192 RATAVVTALPLN--VSIKEIFDFMNSKYRIQLDTYARLGYQARQPLRDMLDCKFKYIFRDRWSDG 254
            ..|.|||.:..|  :.:|.....|...     |.|........:.|.::|  :|.|..| ...||
Human   415 NTTLVVTTILENPYLMLKGNHQEMEGN-----DRYEGFCVDMLKELAEIL--RFNYKIR-LVGDG 471

  Fly   255 -----NATG---GMIGDLILDKADLAIAPFIYSFDRAL---FLQPITK--FSVFREICMFRNPRS 306
                 .|.|   ||:|:||..|||||:|....:.:|..   |.:|...  .|:...:.|.|.|..
Human   472 VYGVPEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGY 536

  Fly   307 VSAGLSATEFLQPFSGGVWLTFALLLLLAGCLLWVTFILERRKQWKP---------------SLL 356
            .|       ||.|||.||||...|..|...|:|::...|...:.:.|               ||.
Human   537 FS-------FLDPFSPGVWLFMLLAYLAVSCVLFLVARLTPYEWYSPHPCAQGRCNLLVNQYSLG 594

  Fly   357 TSCLLSFGAGCIQGAWLTPRSMGGR------MAFFALMVTSYLMYNYYTSIVVSKLLGQPIKSNI 415
            .|.....|....||:.:.||::..|      .||..::::|      ||:.:.:.|..|.:...|
Human   595 NSLWFPVGGFMQQGSTIAPRALSTRCVSGVWWAFTLIIISS------YTANLAAFLTVQRMDVPI 653

  Fly   416 RTLQQLADSN-LDVGIEPTVY---TRIYVETSEEPDVRDLYRKKVLGSKRSPDKIWIPTEAGVLS 476
            .::..|||.. ::.|   |::   :..:.:.|.....:.::  ..:.||: |......||.|:..
Human   654 ESVDDLADQTAIEYG---TIHGGSSMTFFQNSRYQTYQRMW--NYMYSKQ-PSVFVKSTEEGIAR 712

  Fly   477 VRDQEGFVYITGVATGYEFVRKHFLAHQICELNEI-PLRDASHTHTVLAKRSPYAELIKLSELRM 540
            |.: ..:.::      .|.....:...:.|.|.:| .|.|.......:...|.:.:...|:.|::
Human   713 VLN-SNYAFL------LESTMNEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQL 770

  Fly   541 LETGVHFKHERSWMETKLHCYQHNHTV-AVGLEYAAPLFIILLGAIILCMGILGLEVIWH-RH 601
            .|.......:|.|.|......:.:|.. .:|:|....:|::|:..:|:.:.:..||.:|. ||
Human   771 QENNRLEILKRKWWEGGKCPKEEDHRAKGLGMENIGGIFVVLICGLIVAIFMAMLEFLWTLRH 833

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Lig_chan-Glu_bd <235..283 CDD:463166 20/55 (36%)
Periplasmic_Binding_Protein_Type_2 <259..>325 CDD:473866 25/70 (36%)
Lig_chan 343..584 CDD:459656 50/267 (19%)
GRIK4NP_055434.2 PBP1_iGluR_Kainate_KA1_2 24..402 CDD:380616 55/246 (22%)
PBP2_iGluR_kainate_KA1 415..785 CDD:270442 94/403 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 863..889
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 931..956
Blue background indicates that the domain is not in the aligned region.

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