DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75b and GRIK3

DIOPT Version :9

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_000822.2 Gene:GRIK3 / 2899 HGNCID:4581 Length:919 Species:Homo sapiens


Alignment Length:577 Identity:123/577 - (21%)
Similarity:204/577 - (35%) Gaps:173/577 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 HRYH-WLIYDRSMNFSVLESHFKEAQ--------IF---------VDADVTYVTHDPFSK----- 132
            ||:. |....|.|||      .||||        :|         .|.|:..:..|...|     
Human   351 HRHKAWRFGGRFMNF------IKEAQWEGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWS 409

  Fly   133 --NFLLYDVYNKGRQLGGELNIT-----------------------ADREIFCNKTNCRVERYLS 172
              :.|......|||   |. |:|                       :||.::.|.   |.|.|..
Human   410 PADGLNITEVAKGR---GP-NVTDSLTNRSLIVTTVLEEPFVMFRKSDRTLYGND---RFEGYCI 467

  Fly   173 ELYTRSALQHRKSFTGLTMRATAVVTALPLNVSIKEIFDFMNSKYRIQLDTYARLGYQARQPLRD 237
            :|                               :||:...:...|.|:|....:.|.|       
Human   468 DL-------------------------------LKELAHILGFSYEIRLVEDGKYGAQ------- 494

  Fly   238 MLDCKFKYIFRDRWSDGNATGGMIGDLILDKADLAIAPFIYSF--DRAL-FLQPITKFSVFREIC 299
                          .|.....||:.:||..|||||:||...:.  ::|: |.:|.....|   ..
Human   495 --------------DDKGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGV---SI 542

  Fly   300 MFRNPRSVSAGLSATEFLQPFSGGVWLTFALLLLLAGCLLWVTFILERRK--QW------KP--- 353
            ::|.|...:.  |...||.|.|..:|:...|..|...|:|   |::.|..  :|      .|   
Human   543 LYRKPNGTNP--SVFSFLNPLSPDIWMYVLLAYLGVSCVL---FVIARFSPYEWYDAHPCNPGSE 602

  Fly   354 ------SLLTSCLLSFGAGCIQGAWLTPRSM-----GGRMAFFALMVTSYLMYNYYTSIVVSKLL 407
                  :||.|.....|:...||:.|.|:::     ||...||.|::.|     .||:.:.:.|.
Human   603 VVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIIS-----SYTANLAAFLT 662

  Fly   408 GQPIKSNIRTLQQLADSNLDVGIEPTVYTRIYVETSEEPDVRDLYRKKVLGSKRSP-DKIW--IP 469
            .:.::|.|.:...||..           |:|.....::......::|    ||.|. :|:|  :.
Human   663 VERMESPIDSADDLAKQ-----------TKIEYGAVKDGATMTFFKK----SKISTFEKMWAFMS 712

  Fly   470 TEAGVLSVRDQEGF--VYITGVATGYEFVRKHFLAHQICELNEI-PLRDASHTHTVLAKRSPYAE 531
            ::...|...::||.  ......|...|.....::..:.|.|.:| .|.|:..........|||.:
Human   713 SKPSALVKNNEEGIQRALTADYALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRD 777

  Fly   532 LIKLSELRMLETG-VHFKHERSWMETKLHCYQHNHTVAVGLEYAAPLFIILLGAIIL 587
            .|.::.|::.|.. :|...|:.|..:.....::....|:|::....:||:|...::|
Human   778 KITIAILQLQEEDKLHIMKEKWWRGSGCPEEENKEASALGIQKIGGIFIVLAAGLVL 834

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 79/331 (24%)
Lig_chan 343..585 CDD:278489 57/270 (21%)
GRIK3NP_000822.2 PBP1_iGluR_Kainate_GluR5_7 34..417 CDD:107388 17/71 (24%)
ANF_receptor 55..398 CDD:279440 14/52 (27%)
PBP2_iGluR_Kainate_GluR7 433..801 CDD:270441 93/450 (21%)
Lig_chan 564..832 CDD:278489 62/290 (21%)
Glutamate binding. /evidence=ECO:0000250 690..692 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155919
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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