DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir75b and GRIK1

DIOPT Version :9

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_001317923.1 Gene:GRIK1 / 2897 HGNCID:4579 Length:949 Species:Homo sapiens


Alignment Length:579 Identity:122/579 - (21%)
Similarity:215/579 - (37%) Gaps:139/579 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 HRYH-WLIYDRSMNFSVLESHFKEAQIFVDADVTYVTHDPFSKNFLLYDVYNKGRQLGGELNITA 154
            ||:. |.:..|.||.      .|||:  .|....::|   |:|        ..|.:...:|:|.:
Human   349 HRHKPWRLGPRFMNL------IKEAR--WDGLTGHIT---FNK--------TNGLRKDFDLDIIS 394

  Fly   155 DREIFCNKTNCRVERYLSELYTRSALQHRKSFTGLTM----------------RATAVVTAL--- 200
            .:|....|....|.::|.:::.:..:.:..|  ||.|                ..|.:||.:   
Human   395 LKEEGTEKAAGEVSKHLYKVWKKIGIWNSNS--GLNMTDSNKDKSSNITDSLANRTLIVTTILEE 457

  Fly   201 ----------PLNVS----------IKEIFDFMNSKYRIQLDTYARLGYQARQPLRDMLDCKFKY 245
                      ||..:          :||:.:.:...|.::|....:.|.|               
Human   458 PYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQ--------------- 507

  Fly   246 IFRDRWSDGNATGGMIGDLILDKADLAIAPFIYSFDRALFLQPITKFSVFREICMFRNPRSVSAG 310
                  :|.....||:.:||..:||||:||...::.|...:.....|.......::|.|...:.|
Human   508 ------NDKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPG 566

  Fly   311 LSATEFLQPFSGGVWLTFALLLLLAGCLLWVTFILERRKQWKP--------------SLLTSCLL 361
            :.:  ||.|.|..:|:...|..|...|:|:|.......:.:.|              :||.|...
Human   567 VFS--FLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWF 629

  Fly   362 SFGAGCIQGAWLTPRSM-----GGRMAFFALMVTSYLMYNYYTSIVVSKLLGQPIKSNIRTLQQL 421
            ..||...||:.|.|:::     ||...||.|::.|     .||:.:.:.|..:.::|.|.:...|
Human   630 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIIS-----SYTANLAAFLTVERMESPIDSADDL 689

  Fly   422 ADSNLDVGIEPTVYTRIYVETSEEPDVRDLYRKKVLGSKRSPDKIWIPTEAGVLSVRDQ------ 480
            |..           |:|......:......::|..:.:.   :|:|     ..:|.|.|      
Human   690 AKQ-----------TKIEYGAVRDGSTMTFFKKSKISTY---EKMW-----AFMSSRQQTALVRN 735

  Fly   481 --EGF--VYITGVATGYEFVRKHFLAHQICELNEI-PLRDASHTHTVLAKRSPYAELIKLSELRM 540
              ||.  |..|..|...|.....::..:.|.|.:| .|.|:..........|||.:.|.::.|::
Human   736 SDEGIQRVLTTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQL 800

  Fly   541 LETG-VHFKHERSWMETKLHCYQHNHTVAVGLEYAAPLFIILLGAIILCMGILGLEVIW 598
            .|.| :|...|:.|.........:....|:|:|....:||:|...::|.:.:...|.|:
Human   801 QEEGKLHMMKEKWWRGNGCPEEDNKEASALGVENIGGIFIVLAAGLVLSVFVAIGEFIY 859

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 77/330 (23%)
Lig_chan 343..585 CDD:278489 58/272 (21%)
GRIK1NP_001317923.1 Periplasmic_Binding_Protein_Type_1 35..430 CDD:324556 23/101 (23%)
Periplasmic_Binding_Protein_Type_2 446..815 CDD:328725 88/415 (21%)
Glutamate binding. /evidence=ECO:0000250 531..533 1/1 (100%)