DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75b and Ir52b

DIOPT Version :9

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_725469.2 Gene:Ir52b / 246631 FlyBaseID:FBgn0050469 Length:596 Species:Drosophila melanogaster


Alignment Length:723 Identity:148/723 - (20%)
Similarity:244/723 - (33%) Gaps:280/723 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LSHVLILHCSLSHLALLAQSKNIFTQFQPLHSDIQLNDDFLNHNILKLGVFLDINCDKSGTVLDM 82
            ::.::||.|.|.::|  |...:|..|.|      .|.|:.|.:.:|||                 
  Fly     1 MTWLVILLCFLGYMA--AHIADISVQNQ------SLMDNELINLLLKL----------------- 40

  Fly    83 ASAKRFFSHRYHWLIYDRSMNF-SVLESHFKEAQIFVDADVTYVTHD-PFSKNF----LLY---- 137
             ..:.|:.   ..|:|.:...| ||:::        ||..|..|:.. .|..||    |:.    
  Fly    41 -RNEEFYD---TLLVYGKDCEFHSVIKN--------VDVAVVLVSDSMNFEWNFSSLTLILSCGP 93

  Fly   138 DVYNKGRQLGGELNITADREIFCNKTNCRVER--------------YLSELYTRSALQH----RK 184
            |:.|.|.                |.|:.:::|              .:..:||:....:    |:
  Fly    94 DIDNGGP----------------NSTSIKLQRNRRLVLLKEDFQPSNICNIYTQKEQYNIALVRE 142

  Fly   185 SFTGLTMRATAVVTAL--------PLNVS-IKEIF--DFMNSK---YRIQLDTYARLGYQARQPL 235
            :||    ::.::.|..        .:|:| .|.||  .|.|.|   .||..|..         |.
  Fly   143 NFT----KSKSIYTCRYFQDPNVDEVNLSGTKPIFIEQFQNMKGKAIRIVPDLL---------PP 194

  Fly   236 RDMLDCKFKYIFRDRWSDGNATGGMIGDLILDKADLAIAPFIYSFDRAL-------FLQPITKFS 293
            |.||       ::|. :||...  |||         .:|..|.:|.:.:       ||:|.|..:
  Fly   195 RVML-------YQDA-NDGELK--MIG---------YVANLITNFAQKVNATLQLDFLKPSTSIT 240

  Fly   294 VFREICMFRNPRSVSAGLSATEFLQ--------------------------PFSGGVWLTFALLL 332
               ||........:..|::....|.                          |::    |.:||::
  Fly   241 ---EISRMAKDDELDMGITLEASLNTSNLETSSYPYLLTSYCLMVQVPAKFPYN----LVYALIV 298

  Fly   333 --LLAG------CLLWVTFILERRKQWKPSLLTSCLLSFGA--GCIQGAWLTP--RSMGGRMAFF 385
              |:.|      .||.|..|..::..|:...:.:.||:..:  |.:..::..|  .|...|:.|.
  Fly   299 DPLVLGIIFVLFLLLSVLLIYSQKMSWQDLSVANILLNDKSLRGLLGQSFPFPLNASKKLRLIFT 363

  Fly   386 ALMVTSYLMYNYYTSIVVSKLLGQPIKSNIRTLQ-------QLADSNLDV-GIEPTVYT------ 436
            .|...|.::...|.:.:.|.....|.:..|.:.|       ::|.|.|:| |:..|..:      
  Fly   364 ILCFASIMLTTMYEAYLQSFFTNPPSEPEICSFQDVGSYNRRIAMSALEVNGLIKTNNSHFREIR 428

  Fly   437 ----RIYVETSEEPDVRDL----YRKKVLGSKRSPDKIWIPTEAGVLSVRDQ-----EGFVYITG 488
                .|:....|..::||.    |...|.|.:      |       .|..:|     |...|.  
  Fly   429 MDDLEIFDNMPECYELRDAFNLSYNYVVTGDR------W-------RSYAEQQTLFKEPVFYF-- 478

  Fly   489 VATGYEFVRKHFLAHQICELNEIPLRDASHTHTVLAKRSPYAELIKLSELRMLETG-VHFKHERS 552
             |....|.|..||:        :|||          :..||..|.....::..|.| |::     
  Fly   479 -ARDLCFSRLIFLS--------VPLR----------RHLPYRHLFDEHMMQQHEFGFVNY----- 519

  Fly   553 WMETKLHCYQHNHT----VAVGL----EYAAPL--------------FIILLGAIILCMGILGLE 595
            ||         :|:    |.:||    :.:.||              ..|.|.||:||:....||
  Fly   520 WM---------SHSFFDMVRLGLTSLKDLSRPLAYTPSLLMDDISWIMKIYLAAIVLCVFCFLLE 575

  Fly   596 V---IWHR 600
            :   .|.|
  Fly   576 IGVDKWKR 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 73/372 (20%)
Lig_chan 343..585 CDD:278489 58/295 (20%)
Ir52bNP_725469.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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