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Protein Alignment Ir75b and Grin2a

DIOPT Version :9

Sequence 1:	NP_001137966.2	Gene:	Ir75b / 8673994	FlyBaseID:	FBgn0261402	Length:	605	Species:	Drosophila melanogaster
Sequence 2:	NP_036705.3	Gene:	Grin2a / 24409	RGDID:	2737	Length:	1464	Species:	Rattus norvegicus

Alignment Length:	404	Identity:	82/404 - (20%)
Similarity:	142/404 - (35%)	Gaps:	117/404 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly   255 NATGGMIGDLILDKADLAIAPFIYSFDRALFLQPITKFSV-FRE----ICMFRNPRSVSAGLSAT 314
            |...||||:::..:|.:|:.....:.:|:    .:..||| |.|    :.:.|:..:|    |.:
  Rat   491 NVWNGMIGEVVYQRAVMAVGSLTINEERS----EVVDFSVPFVETGISVMVSRSNGTV----SPS 547

  Fly   315 EFLQPFSGGVWLTFALLLLLAGCLLWVTFILERRKQWKPSLLTSCLL--------SFGAGCIQGA 371
            .||:|||..||:...::||:...:  ..|:.|   .:.|......|.        ||..|  :..
  Rat   548 AFLEPFSASVWVMMFVMLLIVSAI--AVFVFE---YFSPVGYNRNLAKGKAPHGPSFTIG--KAI 605

  Fly   372 WL------------------TPRSMGGRMAFFALMVTSYLMYNYYTSIVVSKLLGQPIKSNIRTL 418
            ||                  |.:.|....||||::..:....|....::..:.:.|....:.:..
  Rat   606 WLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDKKF 670

  Fly   419 QQLADSN--LDVGIEPT-----------VYTRIYVETSEEPDVRD-------------LYRKKVL 457
            |:..|.:  ...|..|.           .|...|:....:..|.|             :|...||
  Rat   671 QRPHDYSPPFRFGTVPNGSTERNIRNNYPYMHQYMTRFNQRGVEDALVSLKTGKLDAFIYDAAVL 735

  Fly   458 GSKRSPDKIWIPTEAGVLSVRDQEGFVYITGVATGYEFVRKHFLAHQICELNEIPLRDASHTHTV 522
            ..|...|:       |...|....|:::.|   |||..                          .
  Rat   736 NYKAGRDE-------GCKLVTIGSGYIFAT---TGYGI--------------------------A 764

  Fly   523 LAKRSPYAELIKLSELRMLETGVHFKHERSWMETKLHCYQHNHTV---AVGLEYAAPLFIILLGA 584
            |.|.||:...|.|:.|:.:..|...:.|..|: |.: |:...:.|   .:.::..|.:|.:|..|
  Rat   765 LQKGSPWKRQIDLALLQFVGDGEMEELETLWL-TGI-CHNEKNEVMSSQLDIDNMAGVFYMLAAA 827

  Fly   585 IILCMGILGLEVIW 598
            :.|.:    :..||
  Rat   828 MALSL----ITFIW 837

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.