DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75b and glr-5

DIOPT Version :9

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_505244.1 Gene:glr-5 / 179251 WormBaseID:WBGene00001616 Length:932 Species:Caenorhabditis elegans


Alignment Length:740 Identity:139/740 - (18%)
Similarity:249/740 - (33%) Gaps:238/740 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 CSLSHLALLAQSKNIFTQFQPLH------SDIQLNDDFLNHNILKLGVFLDINCDKSGTVLDMA- 83
            |.|.|....::...:.....|.|      :.:|:....|.|      .||..|.:.|  .:||. 
 Worm   203 CRLLHKKDCSEFSRLLVDMNPEHTYTFLLASLQMGLIELKH------WFLLTNMELS--TMDMEL 259

  Fly    84 ---SAKRF-------------------FSH-RYH----WLI-YDRSMNFSVLESHFKEAQIFVDA 120
               :..||                   ||| :.|    |.: .|.|.|..::|:.|....::..|
 Worm   260 FRYNHARFISPYPVDSTFLTENRDAFNFSHFKEHITEKWAMKTDNSRNLKMMEAVFTFDAVYAFA 324

  Fly   121 DVTYVTHDPFSKNFLLYDV--------------YNKGRQ------------LGGELNITADREIF 159
            :|    .:..|.:..:.||              |..||.            |.|:|         
 Worm   325 NV----FNELSSHMQMNDVPQTLCRKSSRNSRKYQHGRSLIDNIVHNDLHGLSGDL--------- 376

  Fly   160 CNKTNCRVERYLSELYTRSALQHRKSFTGLTMRATAV-----VTALPLNVS---------IKEIF 210
                     |.|:....:|....|....|.:.|...:     .|.:.:|:|         ..::.
 Worm   377 ---------RRLNGHPLKSNFSMRIQLLGYSGRLDDIGFWEPATNVHVNMSGDSKAQLQRNVQVS 432

  Fly   211 DFMNSKYRI----------------QLDTYARL-GYQARQPLRDML-----DCKFKYIF------ 247
            |.:...:|:                :||..::. |:     ..|:|     |..|.|..      
 Worm   433 DELKPHFRVTTIMERPYVMLKKNHYELDANSKFEGF-----CIDLLAELSKDLGFTYTIHAVKDG 492

  Fly   248 ---RDRWSDGNATGGMIGDLILDKADLAIAPFIYSFDRAL---FLQPITKFSVFREICMFRNPRS 306
               .|::.:| :..||:|:::..:|::|:||...::.|:.   |.:|.....:   ..:::.|..
 Worm   493 KYGNDKYGNG-SWDGMMGEILRGEAEMAVAPLTVNYRRSEAVDFTKPFLSLGI---SILYKVPDD 553

  Fly   307 VSAGLSATEFLQPFSGGVWLTFALLLLLAGCLLWVTFILE-RRKQWKPSLLTSC----------- 359
            ....|.:  ||.|.|..:|...|..::..  .|.:.|:.. ...:|  :|..||           
 Worm   554 QQPDLFS--FLNPLSWQIWTAIATSIITV--TLGMYFVANVTPYEW--NLNFSCCTAHEPHPAAA 612

  Fly   360 -----------------------LLS--FGAGCIQG-AWLTPRSMGGRMAFFALMVTSYLMYNYY 398
                                   :||  ...||..| ..::.|.:||....|.|::.|....|..
 Worm   613 FATNQEAPIVMSNNYSFWNTVWYVLSTMLKGGCDFGPRAVSTRLLGGTWWVFYLVIISAYTANLA 677

  Fly   399 TSIVVSKLLGQPIKSNIRTLQQLADSNLDVGIEPTVYTRIYVETSEEPDVRDLYRKKVLGSKRSP 463
            ..:.||:.. .|||:    |..||:.           |.|...|.........:::..:.:.   
 Worm   678 AVLTVSRPY-IPIKN----LDDLANQ-----------TTISYGTIRGGSTMQFFQESRIAAH--- 723

  Fly   464 DKIWIPTEAGVLSVRDQEGFVYITG------VATGYEFVRK----HFLAHQICELNEIPLRDASH 518
            .|:|       ..::|::.||...|      ::..|.::.:    .:...|.|.|.:|.....|.
 Worm   724 VKMW-------QYMKDKDVFVTSNGKGVERALSMNYAYLMESTSLEYETQQNCNLTQIGGVLGSK 781

  Fly   519 THTV-LAKRSPYAELIKLSELRMLETGVHFKHERSWMETK-------LHCYQHNHTVAVGLEYAA 575
            .:.: |||:|.:.:.|....|...:.|:....:..|..:|       ....:|:. .|:.:...|
 Worm   782 GYGIALAKKSEWTDRISRQILLYAKRGIIEMKKTKWWRSKGAACASTASAVKHDR-FALSMYNVA 845

  Fly   576 PLFIILLGAIILCMGILGLEVIWHR 600
            .|||.|...|:|...::..|:| ||
 Worm   846 GLFITLGVGIVLAAIVVIFELI-HR 869

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 67/351 (19%)
Lig_chan 343..585 CDD:278489 56/297 (19%)
glr-5NP_505244.1 PBP1_iGluR_delta_like 26..418 CDD:107376 45/244 (18%)
ANF_receptor 38..377 CDD:279440 37/203 (18%)
PBP2_iGluR_Kainate 438..819 CDD:270432 78/421 (19%)
Lig_chan 568..855 CDD:278489 59/317 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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