DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75b and glr-1

DIOPT Version :9

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_498887.2 Gene:glr-1 / 176204 WormBaseID:WBGene00001612 Length:962 Species:Caenorhabditis elegans


Alignment Length:771 Identity:155/771 - (20%)
Similarity:278/771 - (36%) Gaps:233/771 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LHNLILHNLIHMAKLSHVLIL----HCSL------SHLALLAQSKNIFTQFQPLHSDIQLNDDFL 58
            :..|:...::|.. ...||:|    |.||      .||.....:....:.|.....:.|.....:
 Worm   149 ISELLADFIVHKG-WGEVLVLIDPVHASLHLPSLWRHLRTRTNTSVKASMFDLPADEKQFEAYLM 212

  Fly    59 NHNILKLGVFLDINCDKSGTVLDMASAKR------------FFSHRYHWLI-------YDRSM-- 102
            ..|:::       |.:.:..::|.||.||            |....||:::       ||:.|  
 Worm   213 QFNMMR-------NNETNRILIDCASPKRLKKLLINIRSAQFNQANYHYVLANYDFLPYDQEMFQ 270

  Fly   103 -------NFSV----------LESHFKEA-------QIFVDA----DVTYVTHDPFSK----NFL 135
                   .|::          |:.|.|.:       .:.|:|    |...||...|:|    |..
 Worm   271 NGNINISGFNIINKDGREYWSLKKHLKTSSSLGGGDDVSVEAAVGHDAMLVTWHGFAKCLQANDS 335

  Fly   136 L--------------------------------YDVYNKGRQLG------------GEL--NITA 154
            |                                :..:..|:.:|            |.|  ||..
 Worm   336 LFHGTFRHRRFFNRGFPGIYCDPLSDRSHPNRPFSSFEHGKTIGVAFRNMKIGHKEGTLTGNIEF 400

  Fly   155 DREIFCNKTNCRVERYLSELYT-----------------------RSALQH-RKSFTGLTMRATA 195
            ||  |.|:.|..|.  :.:|.:                       |:..|| |||..........
 Worm   401 DR--FGNRKNFDVS--IVDLVSNTKATFNSKEVLAWRQGVGFFSNRTVAQHSRKSQNDHKDNQVI 461

  Fly   196 VVTAL--PLNVSIKEIFDFM-------NSKYRIQLDTYARLGY--QARQPLRDMLDCKFKYIFR- 248
            |:|.|  |..:..:|..:..       |:|:.         |:  ...:.|.|.:: :|.|..: 
 Worm   462 VLTNLVAPFVMIKRECLEMANLTECQGNNKFE---------GFCIDLLKLLADKIE-EFNYEIKL 516

  Fly   249 -----DRWSDGNATGGMIGDLILDKADLAIAPFIYSFDRAL---FLQPI--TKFSVFREICMFRN 303
                 .:.:|| :..||||:|:..:|...:|....:.:|..   |.:|.  |..|:     |.:.
 Worm   517 GTKAGSKQADG-SWDGMIGELLSGRAHAVVASLTINQERERVVDFSKPFMTTGISI-----MIKK 575

  Fly   304 PRSVSAGLSATEFLQPFSGGVWLTFALLLLLAGCLLWVTFILERRK--QWKPS------------ 354
            |....  .|...|:||.|..:|:  .::....|..: |.|::.|..  :|:..            
 Worm   576 PDKQE--FSVFSFMQPLSTEIWM--YIIFAYIGVSV-VIFLVSRFSPYEWRVEETSRGGFTISND 635

  Fly   355 -LLTSCL-LSFGAGCIQGAWLTPRSMGGRMA-----FFALMVTSYLMYNYYTSIVVSKLLGQPIK 412
             .:.:|| .:..|...||..:.|||:.||:|     ||.:::.|     .||:.:.:.|..:.::
 Worm   636 FSVYNCLWFTLAAFMQQGTDILPRSISGRIASSAWWFFTMIIVS-----SYTANLAAFLTLEKMQ 695

  Fly   413 SNIRTLQQLA-DSNLDVGIEPTVYTRIYVETSEEPDVRDLYRKKVLGSKRSPDKIWIPTEA-GVL 475
            :.|.:::.|| .|.:..||:....|..:.:.|.....:.::|  .:.|:..|  :::.:.| |:.
 Worm   696 APIESVEDLAKQSKIKYGIQGGGSTASFFKYSSVQIYQRMWR--YMESQVPP--VFVASYAEGIE 756

  Fly   476 SVRDQEG-FVY-ITGVATGYEFVRKHFLAHQI-CELNEIPLRDASHTHTVLAKRSPYAELIKLSE 537
            .||..:| :.: :...|..||..||.....:: ..||.|....|:      ...|.:.:.|.|:.
 Worm   757 RVRSHKGRYAFLLEATANEYENTRKPCDTMKVGANLNSIGYGIAT------PFGSDWKDHINLAI 815

  Fly   538 LRMLETGVHFKHERSWMETKLHC----YQHNHTVAVGLEYAAPLFIILLGAIILCM 589
            |.:.|.|...|.|..|...:..|    .....:.::.|...|.:|.||:|.:::.|
 Worm   816 LALQERGELKKLENKWWYDRGQCDAGITVDGSSASLNLSKVAGIFYILMGGMVISM 871

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 77/330 (23%)
Lig_chan 343..585 CDD:278489 61/271 (23%)
glr-1NP_498887.2 PBP1_iGluR_AMPA 10..439 CDD:107375 51/301 (17%)
ANF_receptor 44..417 CDD:279440 50/279 (18%)
Periplasmic_Binding_Protein_Type_2 457..832 CDD:304360 89/410 (22%)
Lig_chan 593..867 CDD:278489 64/291 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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