DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75b and Grik5

DIOPT Version :9

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:XP_030098003.1 Gene:Grik5 / 14809 MGIID:95818 Length:1003 Species:Mus musculus


Alignment Length:688 Identity:153/688 - (22%)
Similarity:268/688 - (38%) Gaps:151/688 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KLSHVLI-LHCSLSHLALLAQSKNI-----FTQFQPL-------HSDIQLNDDFLNHNILKLGVF 68
            |:|.::| .:.|:||| :|..|.|:     |.:..||       .|::.:...|..: ||....|
Mouse   210 KVSTIIIDANASISHL-VLRLSLNLSSPLGFPRSLPLGLSCVLQASELGMTSAFYKY-ILTTMDF 272

  Fly    69 LDINCDKSGTVLDMASAKRF----FSHRYHWLIYDRSMNFSVLESHFKEAQIFVDADVTYVTHDP 129
            ..::.|  |.|.|.::...|    .||.: :..:.||:|.|..|:  .||.       ||  ..|
Mouse   273 PILHLD--GIVEDSSNILGFSMFNTSHPF-YPEFVRSLNMSWREN--CEAS-------TY--PGP 323

  Fly   130 FSKNFLLYDVYNKGRQLGGELNITAD---REIFCNKTNC---------------------RVE-- 168
            .....|::|..:.......|||.:.:   :.:.|...|.                     |||  
Mouse   324 ALSAALMFDAVHVVVSAVRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFN 388

  Fly   169 ------RYLSELYTRSALQHRKSFTGLTMRATAV-VTALPLNVS------IKEIFDFMNSKYRIQ 220
                  .|...:..:|...||:.....:.|..|: .|.|.:|:|      ...:...:.:.|.::
Mouse   389 SKGQRTNYTLRILEKSRQGHREIGVWYSNRTLAMNATTLDINLSQTLANKTLVVTTILENPYVMR 453

  Fly   221 LDTYARLGYQAR------QPLRDMLD-CKFKYIFR-------------DRWSDGNATGGMIGDLI 265
            ...:..|....|      ..||::.: .:|:|..|             ..|:      ||:|:||
Mouse   454 RPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNGSWT------GMVGELI 512

  Fly   266 -LDKADLAIAPFIYSFDRAL---FLQPITK--FSVFREICMFRNPRSVSAGLSATEFLQPFSGGV 324
             ..|||||:|.|..:.:|..   |.:|...  .|:...:.|.|.|...|       ||.|||..|
Mouse   513 NRQKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFS-------FLDPFSPAV 570

  Fly   325 WLTFALLLLLAGCLLWVTFILERRKQWKP---------------SLLTSCLLSFGAGCIQGAWLT 374
            ||...|..|...|:|::...|...:.:.|               :|..|.....|....||:.:.
Mouse   571 WLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRARPHILENQYTLGNSLWFPVGGFMQQGSEIM 635

  Fly   375 PRSMGGR------MAFFALMVTSYLMYNYYTSIVVSKLLGQPIKSNIRTLQQLAD-SNLDVGIEP 432
            ||::..|      .||..::::|      ||:.:.:.|..|.::..:.:...||| :|::.|...
Mouse   636 PRALSTRCVSGVWWAFTLIIISS------YTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIH 694

  Fly   433 TVYTRIYVETSEEPDVRDLYRKKVLGSKRSPDKIWIPTEAGVLSVRDQEGFVYITGVATGYEFVR 497
            ...|..:.:.|.....:.::  ..:.||: |......||.|:..|.:.. :.::. .:|..|:.|
Mouse   695 AGSTMTFFQNSRYQTYQRMW--NYMQSKQ-PSVFVKSTEEGIARVLNSR-YAFLL-ESTMNEYHR 754

  Fly   498 KHFLAHQICELNEI-PLRDASHTHTVLAKRSPYAELIKLSELRMLETGVHFKHERSWMETKLHCY 561
            :     ..|.|.:| .|.|.......:...||:.:.|.|:.|::.|.......:|.|.|......
Mouse   755 R-----LNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPK 814

  Fly   562 QHNHTV-AVGLEYAAPLFIILLGAIILCMGILGLEVIW 598
            :.:|.. .:|:|....:|::|:..:|:.:.:..:|.||
Mouse   815 EEDHRAKGLGMENIGGIFVVLICGLIIAVFVAVMEFIW 852

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 78/328 (24%)
Lig_chan 343..585 CDD:278489 53/265 (20%)
Grik5XP_030098003.1 PBP1_iGluR_Kainate_KA1_2 23..424 CDD:380616 51/229 (22%)
Periplasmic_Binding_Protein_Type_2 437..808 CDD:419667 88/399 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846370
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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