DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75b and Grik3

DIOPT Version :9

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_001074566.1 Gene:Grik3 / 14807 MGIID:95816 Length:919 Species:Mus musculus


Alignment Length:588 Identity:125/588 - (21%)
Similarity:209/588 - (35%) Gaps:173/588 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 HRYH-WLIYDRSMNFSVLESHFKEAQ--------IF---------VDADVTYVTHDPFSK----- 132
            ||:. |....|.|||      .||||        :|         .|.|:..:..|...|     
Mouse   351 HRHKAWRFGGRFMNF------IKEAQWEGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWS 409

  Fly   133 --NFLLYDVYNKGRQLGGELNIT-----------------------ADREIFCNKTNCRVERYLS 172
              :.|......|||   |. |:|                       :||.::.|.   |.|.|..
Mouse   410 PADGLNITEVAKGR---GP-NVTDSLTNRSLIVTTVLEEPFVMFRKSDRTLYGND---RFEGYCI 467

  Fly   173 ELYTRSALQHRKSFTGLTMRATAVVTALPLNVSIKEIFDFMNSKYRIQLDTYARLGYQARQPLRD 237
            :|                               :||:...:...|.|:|....:.|.|       
Mouse   468 DL-------------------------------LKELAHILGFSYEIRLVEDGKYGAQ------- 494

  Fly   238 MLDCKFKYIFRDRWSDGNATGGMIGDLILDKADLAIAPFIYSF--DRAL-FLQPITKFSVFREIC 299
                          .|.....||:.:||..|||||:||...:.  ::|: |.:|.....|   ..
Mouse   495 --------------DDKGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGV---SI 542

  Fly   300 MFRNPRSVSAGLSATEFLQPFSGGVWLTFALLLLLAGCLLWVTFILERRK--QW------KP--- 353
            ::|.|...:.  |...||.|.|..:|:...|..|...|:|   |::.|..  :|      .|   
Mouse   543 LYRKPNGTNP--SVFSFLNPLSPDIWMYVLLAYLGVSCVL---FVIARFSPYEWYDAHPCNPGSE 602

  Fly   354 ------SLLTSCLLSFGAGCIQGAWLTPRSM-----GGRMAFFALMVTSYLMYNYYTSIVVSKLL 407
                  :||.|.....|:...||:.|.|:::     ||...||.|::.|     .||:.:.:.|.
Mouse   603 VVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIIS-----SYTANLAAFLT 662

  Fly   408 GQPIKSNIRTLQQLADSNLDVGIEPTVYTRIYVETSEEPDVRDLYRKKVLGSKRSP-DKIW--IP 469
            .:.::|.|.:...||..           |:|.....::......::|    ||.|. :|:|  :.
Mouse   663 VERMESPIDSADDLAKQ-----------TKIEYGAVKDGATMTFFKK----SKISTFEKMWAFMS 712

  Fly   470 TEAGVLSVRDQEGF--VYITGVATGYEFVRKHFLAHQICELNEI-PLRDASHTHTVLAKRSPYAE 531
            ::...|...::||.  ......|...|.....::..:.|.|.:| .|.|:..........|||.:
Mouse   713 SKPSALVKNNEEGIQRTLTADYALLMESTTIEYITQRNCNLTQIGGLIDSKGYGIGTPMGSPYRD 777

  Fly   532 LIKLSELRMLETG-VHFKHERSWMETKLHCYQHNHTVAVGLEYAAPLFIILLGAIILCMGILGLE 595
            .|.::.|::.|.. :|...|:.|..:.....::....|:|::....:||:|...::|.:.:...|
Mouse   778 KITIAILQLQEEDKLHIMKEKWWRGSGCPEEENKEASALGIQKIGGIFIVLAAGLVLSVLVAVGE 842

  Fly   596 VIW 598
            .|:
Mouse   843 FIY 845

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 79/331 (24%)
Lig_chan 343..585 CDD:278489 57/270 (21%)
Grik3NP_001074566.1 PBP1_iGluR_Kainate_GluR5_7 34..417 CDD:107388 17/71 (24%)
PBP2_iGluR_Kainate_GluR7 433..801 CDD:270441 93/450 (21%)
Glutamate binding. /evidence=ECO:0000250 690..692 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846355
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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