DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75b and grik5

DIOPT Version :10

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:XP_002936446.1 Gene:grik5 / 100497490 XenbaseID:XB-GENE-953974 Length:995 Species:Xenopus tropicalis


Alignment Length:732 Identity:149/732 - (20%)
Similarity:265/732 - (36%) Gaps:208/732 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLQLHNLILHNLIHMAKLSHVLILHCSLSHLALLAQSKNIFTQFQPLHSDIQLNDDFLNHNILKL 65
            :|:|..|:...||....||           :.:|.:|.:.    .||..:|:  ||.::      
 Frog   175 LLRLEELVRQFLISKDTLS-----------VRMLDESNDP----TPLLKEIR--DDKVS------ 216

  Fly    66 GVFLDINCDKSGTVLDMASAKRFFSHRYHWLIYDRSMNFSVLESHFKEAQIFVDADVTYVTHDPF 130
            .:.:|.|...|..:|..||.....|..|.:::  .:|:|.:|             .:..:..|  
 Frog   217 TIIIDANATVSHLILKKASELGMTSAHYKYIL--TTMDFPLL-------------SLEGIVSD-- 264

  Fly   131 SKNFLLYDVYNKGRQLGGE----LNITADREIFCNKTNCRVERYLSELYTRSAL----------- 180
            ..|.|.:.:||.......|    ||::.       :.||.:..||....:.:.:           
 Frog   265 QSNILGFSMYNSSHPFYLEFLRSLNMSW-------RENCELSTYLGPALSAALMFDAVHVVVSAV 322

  Fly   181 ----------------------QHRKS---------FTGLTMRA--------------------- 193
                                  ||..|         :.|||.|.                     
 Frog   323 RELNRSQEIGVKQLSCSTSQIWQHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRILEKAGD 387

  Fly   194 ------------TAVVTALPLNVSIKEIFD--------FMNSKYRIQLDTYARL-------GYQA 231
                        |..:.|..|::|..|..:        .:.:.|.::...|..|       |:.|
 Frog   388 GHREIGVWYSNRTLAMNATSLDLSTSETLENKTLVVTTILENPYMMRKSNYRSLSGNDQYEGFCA 452

  Fly   232 RQPLRDMLDCKFKY--------IFRDRWSDGNATGGMIGDLILDKADLAIAPFIYSFDRAL---F 285
            ...:......:|.|        ::.....:|:.| ||:|:||..|||||:|.|..:.:|..   |
 Frog   453 EMLMELAALLRFNYKIKLVEDGLYGAPEPNGSWT-GMVGELINRKADLAVAAFTITAEREKVIDF 516

  Fly   286 LQPITK--FSVFREICMFRNPRSVSAGLSATEFLQPFSGGVWLTFALLLLLAGCLLWVTFILERR 348
            .:|...  .|:...:.|.|.|...|       ||.|||..|||...|..|...|:|::...|...
 Frog   517 SKPFMTLGISILYRVQMGRKPGYFS-------FLDPFSPAVWLFMLLAYLAVSCVLFLAARLSPY 574

  Fly   349 KQWKP---------------SLLTSCLLSFGAGCIQGAWLTPRSMGGR------MAFFALMVTSY 392
            :.:.|               :|..|.....|....||:.:.||::..|      .||..::::| 
 Frog   575 EWYNPHPCLRERHHILENQYTLGNSLWFPVGGFMQQGSEVMPRALSTRCVSGVWWAFTLIIISS- 638

  Fly   393 LMYNYYTSIVVSKLLGQPIKSNIRTLQQLAD-SNLDVGIEPTVY---TRIYVETSEEPDVRDLYR 453
                 ||:.:.:.|..|.::..|.:...||| :|::.|   |::   |..:.:.|.....:.:: 
 Frog   639 -----YTANLAAFLTVQRMEVPIESADDLADQTNIEYG---TIHGGSTMTFFQNSRYQTYQRMW- 694

  Fly   454 KKVLGSKRSPDKIWIPTEAGVLSVRDQEGFVYITGVATGYEFVRKHFLAHQICELNEI-PLRDAS 517
             ..:.||: |......||.|:..|.:.. :.::. .:|..|:.|:     ..|.|.:| .|.|..
 Frog   695 -NYMNSKQ-PSVFVKSTEEGIARVLNSR-YAFLL-ESTMNEYHRR-----LNCNLTQIGGLLDTK 750

  Fly   518 HTHTVLAKRSPYAELIKLSELRMLETGVHFKHERSWMETKLHCYQHNHTV-AVGLEYAAPLFIIL 581
            .....:...|||.:.|.|:.|::.|.......:|.|.|......:.:|.. .:|:|....:|::|
 Frog   751 GYGIGMPLGSPYRDEITLAILQLQENNRLEILKRKWWEGGKCPKEEDHRAKGLGMENIGGIFVVL 815

  Fly   582 LGAIILCMGILGLEVIW 598
            :..:|:.:.:..:|.:|
 Frog   816 ICGLIIAVFVAIMEFVW 832

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Lig_chan-Glu_bd <235..283 CDD:463166 16/55 (29%)
Periplasmic_Binding_Protein_Type_2 <259..>325 CDD:473866 25/70 (36%)
Lig_chan 343..584 CDD:459656 56/267 (21%)
grik5XP_002936446.1 PBP1_iGluR_Kainate_KA1_2 27..405 CDD:380616 45/276 (16%)
Periplasmic_Binding_Protein_Type_2 418..788 CDD:473866 91/396 (23%)

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