DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75b and grin2b

DIOPT Version :10

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:XP_017948700.2 Gene:grin2b / 100490580 XenbaseID:XB-GENE-949327 Length:1449 Species:Xenopus tropicalis


Alignment Length:395 Identity:84/395 - (21%)
Similarity:153/395 - (38%) Gaps:83/395 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 NAT-GGMIGDLILDKADLAIAPFIYSFDRALFLQPITKFSV-FRE----ICMFRNPRSVSAGLSA 313
            |.| .||||:::..:|.:|:.....:.:|:    .:..||| |.|    :.:.|:..:|    |.
 Frog   488 NGTWNGMIGEVVTKRAYMAVGSLTINEERS----EVVDFSVPFIETGISVMVSRSNGTV----SP 544

  Fly   314 TEFLQPFSGGVWLTFALLLLLAGCLLWVTFILERRKQWKPSLLTSCLL--------SFGAGCIQG 370
            :.||:|||..||:...::||:...:  ..|:.|   .:.|.....||.        ||..|  :.
 Frog   545 SAFLEPFSADVWVMMFVMLLIVSAV--AVFVFE---YFSPVGYNRCLADGREPGGPSFTIG--KA 602

  Fly   371 AWL------------------TPRSMGGRMAFFALMVTSYLMYNYYTSIVVSKLLGQPIKSNIRT 417
            .||                  |.:.|....||||::..:....|....::..:.:.|....:.:.
 Frog   603 IWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGLSDKK 667

  Fly   418 LQQLADSNLDVGIEPTVYTRIYVETSEEPDVRDLYRK----KVLGSKRSPDKIWIPTEAGVLSVR 478
            .|:..|      ..|..........|.|.::|:.|.:    .|..::||.....:..:.|.|   
 Frog   668 FQRPND------FSPAFRFGTVPNGSTERNIRNNYLEMHSYMVKFNQRSVQDALLSLKTGKL--- 723

  Fly   479 DQEGFVYITGVATGYEFVRKHFLA--HQICELNEIPLRDASHT---HTVLAKRSPYAELIKLSEL 538
              :.|:|...|.        :::|  .:.|:|..|.......|   ...:.|.|.:...:.|:.|
 Frog   724 --DAFIYDAAVL--------NYMAGRDEGCKLVTIGSGKVFATTGYGIAIQKDSGWKRQVDLAIL 778

  Fly   539 RMLETGVHFKHERSWMETKLHCYQHNHTV---AVGLEYAAPLFIILLGAIILCMGILGLE--VIW 598
            ::...|...:.|..|: |.: |:...:.|   .:.::..|.:|.:|..|:.|.:....:|  ..|
 Frog   779 QLFGDGEMEELEALWL-TGI-CHNEKNEVMSSQLDIDNMAGVFYMLAAAMALSLITFIMEHLFFW 841

  Fly   599 H-RHC 602
            . |||
 Frog   842 QLRHC 846

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Lig_chan-Glu_bd <235..283 CDD:463166 8/28 (29%)
Periplasmic_Binding_Protein_Type_2 <259..>325 CDD:473866 20/70 (29%)
Lig_chan 343..584 CDD:459656 51/278 (18%)
grin2bXP_017948700.2 PBP1_iGluR_NMDA_NR2 28..383 CDD:380601
PBP2_iGluR_NMDA_Nr2 400..800 CDD:270436 73/347 (21%)
NMDAR2_C 837..1449 CDD:463148 4/10 (40%)
Blue background indicates that the domain is not in the aligned region.

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