DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75b and grin2cb

DIOPT Version :10

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:XP_009305071.3 Gene:grin2cb / 100333648 ZFINID:ZDB-GENE-100308-2 Length:1328 Species:Danio rerio


Alignment Length:624 Identity:123/624 - (19%)
Similarity:223/624 - (35%) Gaps:182/624 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 HSDIQLNDD--FLNHNILKLGVFLDINCDKSGT----VLDMASAKRFFSHRYH-WLIY------- 98
            |.|:..|.|  ..|.:::.:.:..:.:.||.|:    :|.|         ||. |..|       
Zfish   349 HKDLSFNSDGYLTNPSMVIIALDRENHWDKVGSYEGGILQM---------RYPVWPRYGSFLEPV 404

  Fly    99 --DRSMNFSVLESHFKEAQIFVDADVTYVTHDPFSKNFLLYDVYNKGRQLGGELNITADREIFCN 161
              :|.:..:.||.     :.||..:    :.||                        |......|
Zfish   405 SDNRHLTVATLEE-----RPFVIVE----SVDP------------------------ATGTCVRN 436

  Fly   162 KTNCRVERYLSELYTRSALQHRKSFTGLTMRATAVVTALPLNVSIKEIFDFMNSKYRIQLDTYAR 226
            ...||.:...:|    |.:.|.:.:|.|..:...:.....|:.:||..:|       :.|.|..:
Zfish   437 TVPCRRQSNRTE----SIIGHTEPYTKLCCKGFCIDILKKLSRTIKFSYD-------LYLVTNGK 490

  Fly   227 LGYQARQPLRDMLDCKFKYIFRDRWSDGNATGGMIGDLILDKADLAIAPFIYSFDRALFLQPITK 291
            .|                .:.|..|:      ||||::...:||:||.....:.:|:    .|..
Zfish   491 HG----------------KMVRGVWN------GMIGEVFYKRADMAIGSLTINEERS----EIVD 529

  Fly   292 FSV-FRE----ICMFRNPRSVSAGLSATEFLQPFSGGVWLTFALLLLLAGCLLWV---TFILERR 348
            ||| |.|    :.:.|:..:|    |.:.||:|:|..||     :::...||..|   .|:.|  
Zfish   530 FSVPFVETGISVMVARSNGTV----SPSAFLEPYSPAVW-----VMMFVMCLTVVAVTVFVFE-- 583

  Fly   349 KQWKPSLLTSCLLS--------FGAGCIQGAWL-------------TPRSMGGRM-----AFFAL 387
             .:.|......|:|        |..|  :..||             .|:....::     ||||:
Zfish   584 -YFSPVGYNRSLVSAKAPGGPTFTIG--KSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAV 645

  Fly   388 MVTSYLMYNYYTSIVVSKLLGQPIKSNIRTLQQLADSNLDVGIE--PTVYTRIYVETSEEPDVR- 449
            :..:     .||:.:.:.::.:   ..|.|:..|:|.......|  |..........|.|.::| 
Zfish   646 IFLA-----SYTANLAAFMIQE---QYIDTVSGLSDKKFQKPQEHYPPFRFGTVPNGSTERNIRS 702

  Fly   450 ---DLYRKKVLGSKRSPDKIWIPTEAGVLSVRDQEGFVYITGVATGYEFVRKHFLA--HQICELN 509
               |::...:..:::..::.....:.|.|     :.|:|...|.        :::|  .:.|:|.
Zfish   703 NYPDMHTHMIKYNQKGVEEALNSLKTGKL-----DAFIYDAAVL--------NYMAGKDEGCKLV 754

  Fly   510 EIPLRDASHT---HTVLAKRSPYAELIKLSELRMLETGVHFKHERSWMETKLHCYQHNHTV---A 568
            .|.......|   ...|.|.|.:...|.|:.|:.|..|...:.|..|:..  .|....:.|   .
Zfish   755 TIGSGKVFATTGYGIALQKDSRWKRPIDLALLQFLGDGDTQRLETVWLSG--ICQNEKNEVMSSK 817

  Fly   569 VGLEYAAPLFIILLGAIILCMGILGLE--VIWHRHCTLH 605
            :.::..|.:|.:||.|:.|.:.:...|  :.|....::|
Zfish   818 LDIDNMAGVFYMLLVAMGLSLLVFAWEHLLYWKLRHSVH 856

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Lig_chan-Glu_bd <235..283 CDD:463166 10/47 (21%)
Periplasmic_Binding_Protein_Type_2 <259..>325 CDD:473866 22/70 (31%)
Lig_chan 343..584 CDD:459656 52/280 (19%)
grin2cbXP_009305071.3 None

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