DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75b and si:ch211-264f5.8

DIOPT Version :10

Sequence 1:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster
Sequence 2:XP_017207885.1 Gene:si:ch211-264f5.8 / 100331381 ZFINID:ZDB-GENE-081104-209 Length:1063 Species:Danio rerio


Alignment Length:741 Identity:158/741 - (21%)
Similarity:270/741 - (36%) Gaps:200/741 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLQLHNLILHNLIHMAKLSHVLILHCSLSHLALLAQSKNIFTQFQPLHSDIQLNDDFLNHNILKL 65
            :|:|..|:.|.||....|| |.:|..:|....||.                ::.||       |:
Zfish   183 LLRLEELVRHFLISRETLS-VRMLDENLDPTPLLK----------------EIRDD-------KV 223

  Fly    66 G-VFLDINCDKSGTVLDMASAKRFFSHRYHWLIYDRSMNFSV--LESHFKEAQIFVDADVTYVTH 127
            . :.:|.|...|..:|..||.....|..|.:::  .:|:|.:  |:....:....|...:...:|
Zfish   224 ATIIIDANASVSILILKKASELGMTSAFYKYIL--TTMDFPLLRLDDVVNDQSNIVGFSMLNNSH 286

  Fly   128 DPFSKNF-------------------------LLYDV----------YNKGRQLGGE-LNITAD- 155
             ||...|                         |::|.          .|:.:::|.: |:.|:. 
Zfish   287 -PFYLEFIRSLNLSWREGCDLSPYPGPALSSALMFDAVHVVVGAVRELNRSQEIGVKPLSCTSSL 350

  Fly   156 ------------REIFCNKTNCRVERYLSELYTRSALQHRKSFTG-------------LTMRATA 195
                        |.:..:....|||.......|...|:..:.|.|             |.|.:|:
Zfish   351 IWQHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRILEKFKGGHKEIGVWYSNNTLAMNSTS 415

  Fly   196 V--------------VTALPLN--VSIKEIF-DFMNSKYRIQLDTYARLGYQARQPLRDMLDCKF 243
            :              ||.:..|  |..||.: ||..|      |.|........:.|.|:|    
Zfish   416 LDINTSETLANKTLTVTTILENPYVMRKENYQDFQGS------DQYEGFCVDMLRELADIL---- 470

  Fly   244 KYIFRDRWSDGNATG---------GMIGDLILDKADLAIAPFIYSFDRAL---FLQPITK--FSV 294
            |:.||.:..|....|         ||:|:||..|||||:|.|..:.:|..   |.:|...  .|:
Zfish   471 KFSFRIKLVDDGLYGAPEPNGSWTGMVGELINRKADLAVAGFTITSEREKVIDFSKPFMNLGISI 535

  Fly   295 FREICMFRNPRSVSAGLSATEFLQPFSGGVWLTFALLLLLAGCLLWVTFILERRKQWKP------ 353
            ...:.:.|.|...|       ||.|||..|||...|..|...|:|::...|...:.:.|      
Zfish   536 LYRVHIGRKPGYFS-------FLDPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPFPCWRE 593

  Fly   354 ---------SLLTSCLLSFGAGCIQGAWLTPRSMGGR------MAFFALMVTSYLMYNYYTSIVV 403
                     :|..|.....|....||:.:.||::..|      .||..::::|      ||:.:.
Zfish   594 RRDLLENQYTLGNSLWFPIGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISS------YTANLA 652

  Fly   404 SKLLGQPIKSNIRTLQQLAD-SNLDVGIEPTVYTRIYVETSEEPDVRDLYRKKVLGSKRSPDKIW 467
            :.|..|.::..|.:.:.||| :|:..|......|..:...|.....:.::  ..:.||: |....
Zfish   653 AFLTVQRMEVPIESAEDLADQTNIQYGTIQGGSTMTFFMNSRYQTYQRMW--NYMYSKQ-PSVFV 714

  Fly   468 IPTEAGVLSVRDQEGFVYITGVATGYEFVRKHFLAHQICELNEI-PLRDASHTHTVLAKRSPYAE 531
            ..||.|:..|.:.: :.::. .:|..|:.|:     ..|.|.:| .|.|.......:...||:.:
Zfish   715 KSTEEGIARVLNSK-YAFLL-ESTMNEYHRR-----LNCNLTQIGGLLDTKGYGIGMPLGSPFRD 772

  Fly   532 LIKLSELRMLETGVHFKHERSWMETKLHCYQHNHTV-AVGLEYAAPLFIILLGAIILCMGILGLE 595
            .|.|..|::.|.......:|.|.|......:.:|.. .:|::....:|::|:..:|:.:.:..:|
Zfish   773 EITLGILQLQENNRLEILKRRWWEGGKCLKEEDHRAKGLGMDNIGGIFVVLICGLIIAVFVAIME 837

  Fly   596 VIW--------------------HRH 601
            .:|                    |||
Zfish   838 FVWSTRRSAETDEVRPHPCPVRNHRH 863

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75bNP_001137966.2 Lig_chan-Glu_bd <235..283 CDD:463166 20/56 (36%)
Periplasmic_Binding_Protein_Type_2 <259..>325 CDD:473866 24/70 (34%)
Lig_chan 343..584 CDD:459656 53/264 (20%)
si:ch211-264f5.8XP_017207885.1 PBP1_iGluR_Kainate_KA1_2 35..413 CDD:380616 48/256 (19%)
Periplasmic_Binding_Protein_Type_2 426..796 CDD:473866 98/402 (24%)

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