DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42538 and COL28A1

DIOPT Version :10

Sequence 1:NP_001163451.1 Gene:CG42538 / 8673985 FlyBaseID:FBgn0260646 Length:89 Species:Drosophila melanogaster
Sequence 2:NP_001032852.2 Gene:COL28A1 / 340267 HGNCID:22442 Length:1125 Species:Homo sapiens


Alignment Length:69 Identity:17/69 - (24%)
Similarity:29/69 - (42%) Gaps:16/69 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 RPVFQLCTGGRDE---------GNRNGRFCGLTAQNGMWFYNSRSRRCEKMNYRGCGGNGNRYCK 80
            ||:......|.::         ||     ||.....  |:|:.:...|.:..:.||.|:|||:..
Human  1057 RPLLSTPVDGAEDPRCLEALKPGN-----CGEYVVR--WYYDKQVNSCARFWFSGCNGSGNRFNS 1114

  Fly    81 VEDC 84
            .::|
Human  1115 EKEC 1118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42538NP_001163451.1 Kunitz-type <53..86 CDD:438633 10/32 (31%)
COL28A1NP_001032852.2 vWFA_subfamily_ECM 47..209 CDD:238727
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 242..769
gly_rich_SclB <272..>582 CDD:468478
gly_rich_SclB <478..>759 CDD:468478
VWA 798..974 CDD:459670
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 999..1066 2/8 (25%)
Kunitz-type 1072..1122 CDD:444694 14/54 (26%)
Blue background indicates that the domain is not in the aligned region.

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