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Protein Alignment CG42538 and vap-2
DIOPT Version :9
| Sequence 1: | NP_001163451.1 |
Gene: | CG42538 / 8673985 |
FlyBaseID: | FBgn0260646 |
Length: | 89 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001300377.1 |
Gene: | vap-2 / 181273 |
WormBaseID: | WBGene00011462 |
Length: | 507 |
Species: | Caenorhabditis elegans |
| Alignment Length: | 30 |
Identity: | 12/30 - (40%) |
| Similarity: | 17/30 - (56%) |
Gaps: | 6/30 - (20%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 56 YNSRSRRCEK-MNYRGCGGNGNRYCKVEDC 84
||.:: :||| |.|. ||...|:.:||
Worm 252 YNEKA-QCEKEMIYE----NGKPCCEDKDC 276
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| CG42538 | NP_001163451.1 |
KU |
<53..88 |
CDD:294074 |
12/30 (40%) |
Software error:
Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.
For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message
and the time and date of the error.
