DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42538 and Crispld2

DIOPT Version :9

Sequence 1:NP_001163451.1 Gene:CG42538 / 8673985 FlyBaseID:FBgn0260646 Length:89 Species:Drosophila melanogaster
Sequence 2:NP_612527.2 Gene:Crispld2 / 171547 RGDID:620860 Length:497 Species:Rattus norvegicus


Alignment Length:33 Identity:8/33 - (24%)
Similarity:14/33 - (42%) Gaps:4/33 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 SRSRRCEKMNYR----GCGGNGNRYCKVEDCNR 86
            |::::...:|:.    .|.......||...|||
  Rat   273 SKTKKTPVVNFMTQVVHCDTKMKDSCKGSTCNR 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42538NP_001163451.1 KU <53..88 CDD:294074 8/33 (24%)
Crispld2NP_612527.2 SCP_euk 56..201 CDD:240180
LCCL 286..370 CDD:128866 6/20 (30%)
LCCL 389..487 CDD:281766
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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