DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42538 and col28a2a

DIOPT Version :10

Sequence 1:NP_001163451.1 Gene:CG42538 / 8673985 FlyBaseID:FBgn0260646 Length:89 Species:Drosophila melanogaster
Sequence 2:NP_001153314.2 Gene:col28a2a / 100294690 ZFINID:ZDB-GENE-030131-4444 Length:1208 Species:Danio rerio


Alignment Length:31 Identity:13/31 - (41%)
Similarity:18/31 - (58%) Gaps:0/31 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 WFYNSRSRRCEKMNYRGCGGNGNRYCKVEDC 84
            |:|..:|..|.:..|.||.||.||:...|:|
Zfish  1168 WYYEKQSNSCAQFWYGGCDGNDNRFHTEEEC 1198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42538NP_001163451.1 Kunitz-type <53..86 CDD:438633 13/31 (42%)
col28a2aNP_001153314.2 VWA 61..242 CDD:459670
gly_rich_SclB <260..>560 CDD:468478
gly_rich_SclB <511..>795 CDD:468478
VWA 816..995 CDD:459670
Kunitz_collagen_alpha1_XXVIII 1152..1202 CDD:438671 13/31 (42%)
Blue background indicates that the domain is not in the aligned region.

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