DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42397 and LOC4576330

DIOPT Version :10

Sequence 1:NP_001163428.1 Gene:CG42397 / 8673976 FlyBaseID:FBgn0259748 Length:178 Species:Drosophila melanogaster
Sequence 2:XP_061501459.1 Gene:LOC4576330 / 4576330 VectorBaseID:AGAMI1_010339 Length:350 Species:Anopheles gambiae


Alignment Length:213 Identity:45/213 - (21%)
Similarity:75/213 - (35%) Gaps:62/213 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LFALLVSGSTSSGEDTNIKLTTDESTTVEDTTEVLVTTLPP---PVLCADEDLFLPAPDCREYYQ 73
            :.|:||:.|.:        .:..::.....||..|:..:..   |:....:.:.||.|.|..:|:
Mosquito     6 VLAVLVTASQA--------YSVFQNPPCSGTTPCLINCVQNSRCPIYNPAKPVLLPGPTCDRFYK 62

  Fly    74 CLYGEGILKICPDGLYWDRELNVCAWDSQHCADDKNETTT----PS------------------- 115
            |..|.....:||.|.:::.....|.|..:.|.|...|...    ||                   
Mosquito    63 CESGRACETLCPGGTHFNAREQACDWPHRACCDPNIECRPDPCGPSGDCGVDGGPIVPPPPPPPP 127

  Fly   116 ---------------TLNCA--------SGL-PFLPYIPDCTKFIQCVYNIGFKLSCPSGLYWNQ 156
                           .:||.        .|| |.|...|:|..:.:|:......:.||:||::|.
Mosquito   128 PPPPPQPPCSGGGICAINCPVDNRCPMFDGLKPTLLPGPNCGVYAKCIAGRACPMQCPAGLHFNA 192

  Fly   157 PLQSCDY----TCDNAIE 170
            ..|.||:    .||..:|
Mosquito   193 AKQICDWPFQACCDPNVE 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42397NP_001163428.1 CBM_14 58..102 CDD:426342 12/43 (28%)
ChtBD2 125..163 CDD:214696 11/37 (30%)
LOC4576330XP_061501459.1 None

Return to query results.
Submit another query.